| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_4943 |
|---|
| Symbol | |
|---|
| ID | 7261975 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | - |
|---|
| Start bp | 5263838 |
|---|
| End bp | 5264515 |
|---|
| Gene Length | 678 bp |
|---|
| Protein Length | 225 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 643564855 |
|---|
| Product | hydrogenase accessory protein HypB |
|---|
| Protein accession | YP_002461372 |
|---|
| Protein GI | 219670937 |
|---|
| COG category | [K] Transcription
[O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0378] Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase |
|---|
| TIGRFAM ID | [TIGR00073] hydrogenase accessory protein HypB
[TIGR00101] urease accessory protein UreG |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.000345448 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAGCC AGCGTGAAAT TGCCGTTATG GCCAATTTAC TGCAGAATAA TGACATTCAT
GCGGAAATCA ATCGCAAGCA CTTTGAACAT AACAACTGCT TAGCCGTTAA TATGATCGGT
TCTCCGGGGG CAGGAAAAAC CACTCTCCTG GAACGAACGC TGTCCCATTT AAAAGAGAAG
CACAGCATCG CCGTGATCGA GGGGGATATC TTCACCAGCA GAGATGCTGA TCGGATAGCC
CAGCATGATA TTCCTGTGGT TCAGATCAAC ACCGGCGGCG GCTGTCATTT GGATTCCAAA
ATGGTCGAGA AAGTTCTTCC TGAATTTCAG TGGGATAATT TAGATCTGAT GATTATTGAG
AATGTGGGCA ATCTCGTCTG CCCCGCCGAT TTTGATCTGG GGGAAGAATT TAAGGTGGTT
GTCCTTAGCG TCGTTGAAGG GGATGATAAA CCTGCAAAAT ACCCGGTGAT TTTTCGCAAT
TCAAAAGTGG CCGTCTTAAA TAAGATGGAT TTATTGGCTT TGGTGGAAAC GGATTTGGAC
GCCATGAAGA AAGATATATT TAACATCAAT CCGGAGATTA AAATTTTTGA GGTCTCTTGC
CGTACCGGAG AGGGTTTGCA AGAATGGGTC CAGTGGCTTG ATGAACAAGT AAGGCAGGCA
AAAGGTAAGA ATGCATGA
|
|---|
| Protein sequence | MSSQREIAVM ANLLQNNDIH AEINRKHFEH NNCLAVNMIG SPGAGKTTLL ERTLSHLKEK
HSIAVIEGDI FTSRDADRIA QHDIPVVQIN TGGGCHLDSK MVEKVLPEFQ WDNLDLMIIE
NVGNLVCPAD FDLGEEFKVV VLSVVEGDDK PAKYPVIFRN SKVAVLNKMD LLALVETDLD
AMKKDIFNIN PEIKIFEVSC RTGEGLQEWV QWLDEQVRQA KGKNA
|
|---|
| |