| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_4942 |
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| Symbol | |
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| ID | 7261974 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | - |
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| Start bp | 5263440 |
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| End bp | 5263841 |
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| Gene Length | 402 bp |
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| Protein Length | 133 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 643564854 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_002461371 |
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| Protein GI | 219670936 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.00284868 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAGCA ACCATTACCA GCAAGGATTA GATCACCTCG AAGCTGGGCA GCTTCGGGAA
GCAGAAGAAG ACTTCTTGCA GCACTTGGCT CAATGTCCGG AAGATGCGAT GGGTTATAAT
AAATTAGGCC TGGTCTATGG GAAAAGCCAT GATTTTGAAC GTGCTAAAGG GTGTTTCCTT
AAAGCCATCG CATTGGACGA AGGATGTATT CATGCCTGGA ATAACTTGGG GAACATAGCC
CGTCAAGACG GCGACCTGGA TCAAGCCATT CGTTATTACC AAAAGGCAGT AGATATCGAC
CCGATTAATC CGATTCCCGC TAAGAATTTA AAGAGGGTAC AAAGACAAGC CAAATGGTCC
TTTTCAAGAA TAAAGGACCT GTTCGGGAAA AATAGAGACT AA
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| Protein sequence | MSSNHYQQGL DHLEAGQLRE AEEDFLQHLA QCPEDAMGYN KLGLVYGKSH DFERAKGCFL
KAIALDEGCI HAWNNLGNIA RQDGDLDQAI RYYQKAVDID PINPIPAKNL KRVQRQAKWS
FSRIKDLFGK NRD
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