Gene Dhaf_4930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_4930 
Symbol 
ID7261962 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp5254979 
End bp5256937 
Gene Length1959 bp 
Protein Length652 aa 
Translation table11 
GC content52% 
IMG OID643564843 
ProductSigma 54 interacting domain protein 
Protein accessionYP_002461360 
Protein GI219670925 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1067] Predicted ATP-dependent protease 
TIGRFAM ID[TIGR00764] lon-related putative ATP-dependent protease
[TIGR02903] ATP-dependent protease, Lon family 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.327719 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGGGT TATTAAATCA TTGGTTTAAA AAGAACGAAA CCGAACCAAT TCAAGAGGCA 
GAGGAAACCA ACCAACCAAG CAGCCAAGTG GAAGAGCTGA AGGAGGATGT CCGGAACAGC
CATGAGCAAT GGCATCATGA AGTGGATGCC CTCTATAGTC TGCTCGTTAA TTACTACGGG
AGCGATAAAT TGGTTTTAAA GGCCACCCGC CTGGAAGCTA TTCATCTTAT CCAATCCGAT
ACCATCGGGG AGCGTACGGC CGGTCTGCTC AAGATCATTT TGGACGATCC CACAGACCGC
CCCCTGCCCA GTGAAGAGGA GATTCCTCAG CTTTTGATGG AAATTGAGGA CCATTTAGCT
GAGCTGATCG CCCGCAGGGC TGTTGAAGAC CGTTTGGATA AAGCGGTGGC AGATAAAATG
CAGGAGCGGC ATGAGGATTA TGTCAAAGAA ATAAAAAGCC AGCTTCTCAA GGAAAATTCC
GGACCGGATA ATGCCCAGAC CCTCAAGAAA TTAGCCCATA TCGAAAAGAT GAATCTGGTG
AAACTGGCCA GTTCTGTTGC GGAGGTACTG CGGCCCCAGG CTGTTGAAGA AATCATCGGC
CAGGAAGTTC CCATGCAGTT TCTCCTGGCT AAGCTGGCTA CGCCCTATCC CCAGCACATC
ATTATCTATG GACCTCCGGG TGTGGGCAAA ACGTCGGCGG CCCGGGTAGC CTTAGAGGCC
GTCAAAAAGA ATGTCAATTC TCCCTTTGCC GAGAGTGCTC CCTTTGTGGA AGTGGATGGT
ACGACCCTGC GCTGGGATCC CCGGGATGTT ACCAATCCCT TATTGGGCTC CGTGCATGAT
CCCATCTATC AGGGAGCAAA GCGGGATCTG GCCGAGACCG GGATTCCTGA GCCGAAGCTG
GGTTTAGTCA GTGATGCTCA TGGGGGTATT TTATTTATCG ATGAAATCGG GGAGATGGAC
CCTGTCCTTT TAAATAAGCT TCTTAAAGTC CTGGAGGATA AACGGGTTGC TTTCGAATCC
GCTTATTATG ACCCCAACGA TCCTCAGGTG CCTCTTTATA TCAAAAAGCT TTTTGAAGAG
GGTGCCCCTG CCGACTTTGT GTTAATTGGG GCAACCACCC GGGATCCCAG GGAACTCAAC
CCTGCTTTGC GTTCCCGCTG TGGGGAGATT TATTTTAATC CCTTGGAACC AAGGGATATT
CAGCATATCG TTTCCCAGGC TGCCCAAAAG CTGGGAGCGA ACCTGGAGGC CAAAGTACCG
GAGGTTATCA GTGAGTATGT CTTTGAAGGC AGGAAGGCCA ATACCATCCT TACCGATGCT
TATGGACTGT CCCGTTACCG CCATCCGGAA CAGGAAGTTC TGGTGAAGGC TGAGGAAGTT
TATGAAGTAT TGCGTTCAGC CCGGCTTACC CCCTATATCT CCCATAAGGC GGCAGACCGC
GGTGAAACAG GAAAGATATT GGGTCTCGGC GTTCATGGTT TTGTCGGTTC CGTCCTTGAG
CTGGAGGCTA TCGTTTTCCC GGGCCGGGAA GGAAAAGGCA CCATCCGCTT CAATGAAACC
GCCGGCAGCA TGGCCCGGGA CGCTGTCTTC AACGCCACGG CCGTGATTCG TTCCCTCACC
GGCGAAGACC TCAAAGATTA CGATGTTCAT GTTAACGTGG TCGGAGGAGG GAATATCGAC
GGGCCCTCCG CAGGATGCGC CACCACCCTG GCCATCTACA GCGCGTTGAA AAACATACCG
CTGCGGCAGG ATATCGCCGT CACCGGTGAA ATATCCATTC AAGGAAGAGT ACGGCCCGTA
GGGGGCATTG CCGAGAAGAT CTTTGGCGCC AAGCAGGCCG GGGTAAAAAC CGTCCTCATC
CCCAAAGAAA ATCAAGCAGA TGTGCCCTCC GGCCTGCAGG GAATCCAGGT GATCCCCATC
GAAACTTTCC GGGAAGCCCT TGAACATGCC TTATTTTAA
 
Protein sequence
MKGLLNHWFK KNETEPIQEA EETNQPSSQV EELKEDVRNS HEQWHHEVDA LYSLLVNYYG 
SDKLVLKATR LEAIHLIQSD TIGERTAGLL KIILDDPTDR PLPSEEEIPQ LLMEIEDHLA
ELIARRAVED RLDKAVADKM QERHEDYVKE IKSQLLKENS GPDNAQTLKK LAHIEKMNLV
KLASSVAEVL RPQAVEEIIG QEVPMQFLLA KLATPYPQHI IIYGPPGVGK TSAARVALEA
VKKNVNSPFA ESAPFVEVDG TTLRWDPRDV TNPLLGSVHD PIYQGAKRDL AETGIPEPKL
GLVSDAHGGI LFIDEIGEMD PVLLNKLLKV LEDKRVAFES AYYDPNDPQV PLYIKKLFEE
GAPADFVLIG ATTRDPRELN PALRSRCGEI YFNPLEPRDI QHIVSQAAQK LGANLEAKVP
EVISEYVFEG RKANTILTDA YGLSRYRHPE QEVLVKAEEV YEVLRSARLT PYISHKAADR
GETGKILGLG VHGFVGSVLE LEAIVFPGRE GKGTIRFNET AGSMARDAVF NATAVIRSLT
GEDLKDYDVH VNVVGGGNID GPSAGCATTL AIYSALKNIP LRQDIAVTGE ISIQGRVRPV
GGIAEKIFGA KQAGVKTVLI PKENQADVPS GLQGIQVIPI ETFREALEHA LF