Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_4930 |
Symbol | |
ID | 7261962 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | - |
Start bp | 5254979 |
End bp | 5256937 |
Gene Length | 1959 bp |
Protein Length | 652 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 643564843 |
Product | Sigma 54 interacting domain protein |
Protein accession | YP_002461360 |
Protein GI | 219670925 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1067] Predicted ATP-dependent protease |
TIGRFAM ID | [TIGR00764] lon-related putative ATP-dependent protease [TIGR02903] ATP-dependent protease, Lon family |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.327719 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGGGT TATTAAATCA TTGGTTTAAA AAGAACGAAA CCGAACCAAT TCAAGAGGCA GAGGAAACCA ACCAACCAAG CAGCCAAGTG GAAGAGCTGA AGGAGGATGT CCGGAACAGC CATGAGCAAT GGCATCATGA AGTGGATGCC CTCTATAGTC TGCTCGTTAA TTACTACGGG AGCGATAAAT TGGTTTTAAA GGCCACCCGC CTGGAAGCTA TTCATCTTAT CCAATCCGAT ACCATCGGGG AGCGTACGGC CGGTCTGCTC AAGATCATTT TGGACGATCC CACAGACCGC CCCCTGCCCA GTGAAGAGGA GATTCCTCAG CTTTTGATGG AAATTGAGGA CCATTTAGCT GAGCTGATCG CCCGCAGGGC TGTTGAAGAC CGTTTGGATA AAGCGGTGGC AGATAAAATG CAGGAGCGGC ATGAGGATTA TGTCAAAGAA ATAAAAAGCC AGCTTCTCAA GGAAAATTCC GGACCGGATA ATGCCCAGAC CCTCAAGAAA TTAGCCCATA TCGAAAAGAT GAATCTGGTG AAACTGGCCA GTTCTGTTGC GGAGGTACTG CGGCCCCAGG CTGTTGAAGA AATCATCGGC CAGGAAGTTC CCATGCAGTT TCTCCTGGCT AAGCTGGCTA CGCCCTATCC CCAGCACATC ATTATCTATG GACCTCCGGG TGTGGGCAAA ACGTCGGCGG CCCGGGTAGC CTTAGAGGCC GTCAAAAAGA ATGTCAATTC TCCCTTTGCC GAGAGTGCTC CCTTTGTGGA AGTGGATGGT ACGACCCTGC GCTGGGATCC CCGGGATGTT ACCAATCCCT TATTGGGCTC CGTGCATGAT CCCATCTATC AGGGAGCAAA GCGGGATCTG GCCGAGACCG GGATTCCTGA GCCGAAGCTG GGTTTAGTCA GTGATGCTCA TGGGGGTATT TTATTTATCG ATGAAATCGG GGAGATGGAC CCTGTCCTTT TAAATAAGCT TCTTAAAGTC CTGGAGGATA AACGGGTTGC TTTCGAATCC GCTTATTATG ACCCCAACGA TCCTCAGGTG CCTCTTTATA TCAAAAAGCT TTTTGAAGAG GGTGCCCCTG CCGACTTTGT GTTAATTGGG GCAACCACCC GGGATCCCAG GGAACTCAAC CCTGCTTTGC GTTCCCGCTG TGGGGAGATT TATTTTAATC CCTTGGAACC AAGGGATATT CAGCATATCG TTTCCCAGGC TGCCCAAAAG CTGGGAGCGA ACCTGGAGGC CAAAGTACCG GAGGTTATCA GTGAGTATGT CTTTGAAGGC AGGAAGGCCA ATACCATCCT TACCGATGCT TATGGACTGT CCCGTTACCG CCATCCGGAA CAGGAAGTTC TGGTGAAGGC TGAGGAAGTT TATGAAGTAT TGCGTTCAGC CCGGCTTACC CCCTATATCT CCCATAAGGC GGCAGACCGC GGTGAAACAG GAAAGATATT GGGTCTCGGC GTTCATGGTT TTGTCGGTTC CGTCCTTGAG CTGGAGGCTA TCGTTTTCCC GGGCCGGGAA GGAAAAGGCA CCATCCGCTT CAATGAAACC GCCGGCAGCA TGGCCCGGGA CGCTGTCTTC AACGCCACGG CCGTGATTCG TTCCCTCACC GGCGAAGACC TCAAAGATTA CGATGTTCAT GTTAACGTGG TCGGAGGAGG GAATATCGAC GGGCCCTCCG CAGGATGCGC CACCACCCTG GCCATCTACA GCGCGTTGAA AAACATACCG CTGCGGCAGG ATATCGCCGT CACCGGTGAA ATATCCATTC AAGGAAGAGT ACGGCCCGTA GGGGGCATTG CCGAGAAGAT CTTTGGCGCC AAGCAGGCCG GGGTAAAAAC CGTCCTCATC CCCAAAGAAA ATCAAGCAGA TGTGCCCTCC GGCCTGCAGG GAATCCAGGT GATCCCCATC GAAACTTTCC GGGAAGCCCT TGAACATGCC TTATTTTAA
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Protein sequence | MKGLLNHWFK KNETEPIQEA EETNQPSSQV EELKEDVRNS HEQWHHEVDA LYSLLVNYYG SDKLVLKATR LEAIHLIQSD TIGERTAGLL KIILDDPTDR PLPSEEEIPQ LLMEIEDHLA ELIARRAVED RLDKAVADKM QERHEDYVKE IKSQLLKENS GPDNAQTLKK LAHIEKMNLV KLASSVAEVL RPQAVEEIIG QEVPMQFLLA KLATPYPQHI IIYGPPGVGK TSAARVALEA VKKNVNSPFA ESAPFVEVDG TTLRWDPRDV TNPLLGSVHD PIYQGAKRDL AETGIPEPKL GLVSDAHGGI LFIDEIGEMD PVLLNKLLKV LEDKRVAFES AYYDPNDPQV PLYIKKLFEE GAPADFVLIG ATTRDPRELN PALRSRCGEI YFNPLEPRDI QHIVSQAAQK LGANLEAKVP EVISEYVFEG RKANTILTDA YGLSRYRHPE QEVLVKAEEV YEVLRSARLT PYISHKAADR GETGKILGLG VHGFVGSVLE LEAIVFPGRE GKGTIRFNET AGSMARDAVF NATAVIRSLT GEDLKDYDVH VNVVGGGNID GPSAGCATTL AIYSALKNIP LRQDIAVTGE ISIQGRVRPV GGIAEKIFGA KQAGVKTVLI PKENQADVPS GLQGIQVIPI ETFREALEHA LF
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