| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_4926 |
|---|
| Symbol | |
|---|
| ID | 7261957 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | - |
|---|
| Start bp | 5249021 |
|---|
| End bp | 5250211 |
|---|
| Gene Length | 1191 bp |
|---|
| Protein Length | 396 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 643564838 |
|---|
| Product | Extracellular ligand-binding receptor |
|---|
| Protein accession | YP_002461356 |
|---|
| Protein GI | 219670921 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.00000000000560657 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAGAA TGTTCGGTAT CGTATTCTCT CTCGTCCTGA CCCTTGGTCT TCTGTCCGGT
TGCGGAGGAA CGGATAAAGC TCCAGCTCCA GGCGGAGAAC CCAACGCAGG CGGCAAAGAA
CCGGCTGCAA CCGCCGCCTT TAAGATTGGC GGTACCGGTC CTCTGACCGG TGGAGCAGCC
ATTTACGGCA ACGCGGCCAA GAATGGCGCG CAGATAGCTG TTGATGAGAT TAATGCCCTG
GGCGGCATCC AGTTCGAACT CAAATATGAA GATGATGAGC ATGATGCTGA GAAGGCCGTT
AATGCTTACA ATAAGCTGAA GGACTGGGGC GTGCAGATGT CCCTCGGTTC CGTGACCAGC
ACGCCCGGTG TGGCCACCAG TGCTGAGATG TTCAGCGATC GTATATTTGC CCTGACTCCC
TCCGCGTCCG CTCCCGCTGT CATTGAGGGC AAGGATAATA TCTATCAGAT GTGCTTCTCC
GACCCCAACC AGGGTTCGGC TTCCGCTCAG TATATCGCTG ACAAAAAGCT TGGCACAAAA
ATTGCGATTA TCTACAAGAA TGACGATGTA TATTCCAAGG GAATCTATAA TACTTTCGTT
AGCAAAGCCA AAGAACTGAA TCTGGAGATC GTCTCCACAA CCACCTTCAC TGAGGACAGC
CAGACCGACT TTTCCGTTCA GCTGGCCGAT GCCAAGAAAA ATGGCGCCGA TTTAATCTTC
CTGCCTATGT ATTATACCCC GGCCTCTCTG ATCTTCCAGC AGGCTAAGTC TATGGACTAC
TCCCCCAAAT ACTTCGGTGT GGACGGCATG GACGGCATCC TGACTCTGGA GAACTTTGAT
AAATCCCTGG CTGAAGGCGT TATGCTCCTG ACCCCCTTCA GTGCCGACGC TACCGATGAG
CGTACCGTCA ACTTCGTCAA GAAATACCAG GAACTATTTA AAGAGACTCC CAACCAGTTC
GCCGCCGACG GTTATGATGT GGTGTATGCC TACAAGAAAG CCATTGAGGC TGCCGGCATC
ACCCCTGATA TGAAGGCCGC CGATATCTGT GAGAAACTGG TCCAAGTATT CCCCACTATT
TCTGTTGACG GACTTACCGG TGAGAAAATG ACCTGGGCCA AGACTGGTGA AGTTTCTAAG
AAACCTAAAG GAATGGTCAT AGAAAAGGGT ACCTACGTCG GTATGGACTA A
|
|---|
| Protein sequence | MKRMFGIVFS LVLTLGLLSG CGGTDKAPAP GGEPNAGGKE PAATAAFKIG GTGPLTGGAA
IYGNAAKNGA QIAVDEINAL GGIQFELKYE DDEHDAEKAV NAYNKLKDWG VQMSLGSVTS
TPGVATSAEM FSDRIFALTP SASAPAVIEG KDNIYQMCFS DPNQGSASAQ YIADKKLGTK
IAIIYKNDDV YSKGIYNTFV SKAKELNLEI VSTTTFTEDS QTDFSVQLAD AKKNGADLIF
LPMYYTPASL IFQQAKSMDY SPKYFGVDGM DGILTLENFD KSLAEGVMLL TPFSADATDE
RTVNFVKKYQ ELFKETPNQF AADGYDVVYA YKKAIEAAGI TPDMKAADIC EKLVQVFPTI
SVDGLTGEKM TWAKTGEVSK KPKGMVIEKG TYVGMD
|
|---|
| |