| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_4922 |
|---|
| Symbol | |
|---|
| ID | 7261953 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | - |
|---|
| Start bp | 5245409 |
|---|
| End bp | 5246110 |
|---|
| Gene Length | 702 bp |
|---|
| Protein Length | 233 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 643564834 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_002461352 |
|---|
| Protein GI | 219670917 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0000000104533 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTGAAAG TCGATAATAT CAACGTTTTT TACGGTGCGA TACACGCCAT CAAGGGTATC
TCCCTGGAGG TCAACGAAGG TGAGATCGTG ACTCTGATCG GGGCCAATGG AGCCGGCAAG
AGCACCGTGC TCAAGACTAT TTCCGGCTTG CTGCGCACCA AGACCGGCGG CATAAACTTC
TTGGGCAAAG ACATCACTTC CACGCTACCC CACAAGATTG TGGAACGCGG TTTGGCTCAT
GTCCCTGAAG GCAGGCGGAT TTTTCTGCAA ATGACCGTCC AGGAGAATCT GGAAATGGGC
GCCTACACCC GTCCTTCCGG CGATATCGAG GCCGAGTTGG AAAAGGTCTA CGTTCTGTTT
CCGCGACTTC TGGAACGCCG CAGACAGGTT GCGGGCACCC TTTCCGGAGG GGAGCAGCAG
ATGCTGGCCA TCGGCCGGGC GCTGATGAGC AAGCCTAAAC TTCTGATGCT GGATGAGCCC
TCCATGGGCC TTGCGCCGAT ACTGGTGGAG CAGATCTTCA CCATTATCCA GGAGATGAAC
AAAGCCGGAA CCACTGTCCT TCTTGTGGAG CAGAATGCCC AGATGGCTTT ATCTATTGCT
GATAGAGCCT ACGTTCTGGA GACCGGCTCC ATCTCCATTT CCGGCACCGG CCGGGAACTG
GCCGAGAGCG ATGAGATCCG CAAGGCCTAT CTGGGAGGCT GA
|
|---|
| Protein sequence | MLKVDNINVF YGAIHAIKGI SLEVNEGEIV TLIGANGAGK STVLKTISGL LRTKTGGINF
LGKDITSTLP HKIVERGLAH VPEGRRIFLQ MTVQENLEMG AYTRPSGDIE AELEKVYVLF
PRLLERRRQV AGTLSGGEQQ MLAIGRALMS KPKLLMLDEP SMGLAPILVE QIFTIIQEMN
KAGTTVLLVE QNAQMALSIA DRAYVLETGS ISISGTGREL AESDEIRKAY LGG
|
|---|
| |