| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_4909 |
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| Symbol | |
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| ID | 7261938 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | - |
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| Start bp | 5229205 |
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| End bp | 5230788 |
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| Gene Length | 1584 bp |
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| Protein Length | 527 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 643564819 |
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| Product | choline/carnitine/betaine transporter |
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| Protein accession | YP_002461339 |
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| Protein GI | 219670904 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1292] Choline-glycine betaine transporter |
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| TIGRFAM ID | [TIGR00842] choline/carnitine/betaine transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 64 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTTACAAG AGAAGCTGGA GAAAATACCC AAATCCAAGA GTGTAGATGC TCGTATTAAT
CCTGTTGTTT TCTGGGGCAG CGCTATCTTA TGTGTGGCGC TATATGCCCC GATGATGATT
TTTGGCACAG AACTACAGCC CTTTGTTGCA GCCGCATTGA AAGCGATCAC CTATAGAATG
GACTGGTTAT GGTTATTATT TGCTTTGGGT TGCGTCATAT TTTCACTGTG GTTGGCTTTT
GGCAGATATG GCAATGTCAA ATTGGGTGGA CCCGATGATA AACCTCAATT CTCAAACTTC
AGCTGGATAT CGATGATGTT CACAGGCGGT GTGGGAGCAG GGCTGGTTTA TTGGACCATG
GCTGAGCCTA TCTTTTATCT TAAGTGGCCT CCTTACTGGG GTGAGGCATT TTCAGCGCAA
GCTGCCCAAT TCTCTCTTGC TTATGGAATA TTTCACTGGG GTATTTCAGC CTGGGCTATC
TTTGTCCCGG GAGCCATCGC CTTCGCTTAC ATGATTTATG TAAGGAAAAA GCCCTATTTT
TACCCAAGCT ATGCTTGCCG GGGAATATTG GGAGACCGGG TTGACGGCTG GCTGGGCAGA
GTTATCGATA TCTTTGTTAT TATCGGTCTG GTAGGCGGAT TAGGAACCAC CTTAGGAACG
GTTGTCCCCA TGATATCAGC GGTAACCGCC AATATGCTGG GTGTCGAGGA TTCTATGACG
GTAAAAGTTG GGGTCACCCT GGTGATTTCG GCGGTATTTG GCTATAGTGC TTACTCAGGG
TTAAATAGCG GCATTAAGAA ATTATCGGAA TTAAACAGTT GGCTCTGTAT GGGATTACTG
GCTTTTGTGA TGCTTGTAGG CCCCACGCTG TTTATGTTAT CCATGTATGT TGACAGCATA
GGGGTTTGGG CGACTAACTT TTTACGGATG AGTTTGTATA CAGATCCAAT TACCAAATCA
GGCTTTCCTC AGGACTGGAC AGTATTTTAT TGGGCCTGGT GGGCTGCATG GGCCATGTAC
TTCGGATTAT TCGTGGCCAG AATCTCCAGG GGGAGAACGA TCAGAAATGT TGTTGTCAAT
ATGATGATCG TAACCACCAT CGGCTGTTCA CTGTTCTTCT TGGTATTTGG TGGCTATGCA
GTCGATCTTC AGCTTAATCA AGGAGTGGCC CTTGATCAGA CTTTGGCTGA GTTCGGTGGC
GGGGCAATGA TCACCCAAGT TCTAAATACC TTGCCCTTAA CGGCCATAGT GATTCCCTAT
TTCTTATTTG TAATGCTTAT TTTCCAGGCT ACGACCATCG ATTCCAATGC CTATATTATT
TCCATGATCG CGTGCAAAGA GGTTAAGAAT GATCAGGAAT CCCCCCGCTG GACCAGACTT
TTCTGGTGTT CAGCCTTGGC TGTGATCGGA GTGGCGATCA TGACGGTGGG CGGATTACCG
GTAGTGCAGC TCTCCTCTGT TGCCACCAGC GTACCTACTA TAATTATTAT CGTTATCTTA
GGGATGTCCT TATGCAAGTG GCTTAAGGAG GATTTCGGCA AAGAAAAAGA AGTCCAGGTT
ATCGATTATC CGGAAGAAGA CTAA
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| Protein sequence | MLQEKLEKIP KSKSVDARIN PVVFWGSAIL CVALYAPMMI FGTELQPFVA AALKAITYRM
DWLWLLFALG CVIFSLWLAF GRYGNVKLGG PDDKPQFSNF SWISMMFTGG VGAGLVYWTM
AEPIFYLKWP PYWGEAFSAQ AAQFSLAYGI FHWGISAWAI FVPGAIAFAY MIYVRKKPYF
YPSYACRGIL GDRVDGWLGR VIDIFVIIGL VGGLGTTLGT VVPMISAVTA NMLGVEDSMT
VKVGVTLVIS AVFGYSAYSG LNSGIKKLSE LNSWLCMGLL AFVMLVGPTL FMLSMYVDSI
GVWATNFLRM SLYTDPITKS GFPQDWTVFY WAWWAAWAMY FGLFVARISR GRTIRNVVVN
MMIVTTIGCS LFFLVFGGYA VDLQLNQGVA LDQTLAEFGG GAMITQVLNT LPLTAIVIPY
FLFVMLIFQA TTIDSNAYII SMIACKEVKN DQESPRWTRL FWCSALAVIG VAIMTVGGLP
VVQLSSVATS VPTIIIIVIL GMSLCKWLKE DFGKEKEVQV IDYPEED
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