Gene Dhaf_4880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_4880 
Symbol 
ID7261909 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp5203256 
End bp5204344 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content51% 
IMG OID643564790 
Producthypothetical protein 
Protein accessionYP_002461310 
Protein GI219670875 
COG category[S] Function unknown 
COG ID[COG1915] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCTTCC GGATTCCTCA GTTCAATCCG CCTGATTTTG ACGGTGAGCC TTTGGCAAGT 
GCTCCCAATG CCACCCTTGT CGAAGTCCTT CAGGATGGGG TAGCCCCCGA CCATTTCCAT
GGTATGTCAA TCTATCCCGA ATACTTTAAA ATCAACGGCC AATGGCTCCT TGCTTCCCAA
AGCCGCATGG ACGGTGTTCC CGTGCTCATG GAGAACGGCA CGATGCAAAT CATCGAATTC
CGCAATCTGA AAAAAGGCCA TAAAGTGGTG ATCGGGCGGA CGGAAGATGC CAGTGAAGGC
ATTTATGTCT ATGCCGAAGG TTTTGCTTCC AAGGACAGCA ATAGAGATAT TTTTGCCTTT
CGCTCCGGCC GTTCCCGGGA GACGGCCTAT TCAAAGGATT ATAACCATCT TTATGATCTG
CTGCGTCACG AAAAAGACAA CGGTTATGTG GTCTGGGTGC TGGGACCTGC CGTGGTTTTT
GATTACGACT CCCGGGTGGC CCTGGCCGCC TTGATCGAAA AAGGCTATGT TCACGCCATT
TTGGCCGGCA ATGCCATGGC CACCCATGAT CTTGAGGCCG GCATCCTGGG TACTGCTTTA
GGGCAAAATA TCTACACTCA GGAGTCTCAG CCTAACGGTC ATTACAATCA TTTGGATATC
ATCAATATGG CCAGAAAAGC CGGGTCACTG GAAAAACTCA TTGAAGCTCA GAACCTGAGT
GAAGGTGTGG TCCCTGCCGC ATTAAATAAG AACATCCCTT TGATCCTGGC GGGCTCTATC
CGTGATGACG GTCCCCTGCC CTCTGTATGG GCCAATGTCT ACGCAGCTCA GGATGAAATG
CGCCGGCAAA CCAAACAGGC CACCACCCTC ATCTGCCTGG CCACCCAGCT CCATACCATC
GCTGCCGGCA ATATGACACC TGCTTATACC CAGAGGGATG GGCAGCTGCG TCCTGTCTAC
ATCTATGCTG TGGATGTGGC GGAGTTCACC TTAAATAAGC TGAGAGATCG GGGGTCTCTC
GAAGTCACCA CCATCGTGGC CAATGTCCAG GACTTTCTCG TCAATGTCAA TAATAATCTT
AATGAATAA
 
Protein sequence
MSFRIPQFNP PDFDGEPLAS APNATLVEVL QDGVAPDHFH GMSIYPEYFK INGQWLLASQ 
SRMDGVPVLM ENGTMQIIEF RNLKKGHKVV IGRTEDASEG IYVYAEGFAS KDSNRDIFAF
RSGRSRETAY SKDYNHLYDL LRHEKDNGYV VWVLGPAVVF DYDSRVALAA LIEKGYVHAI
LAGNAMATHD LEAGILGTAL GQNIYTQESQ PNGHYNHLDI INMARKAGSL EKLIEAQNLS
EGVVPAALNK NIPLILAGSI RDDGPLPSVW ANVYAAQDEM RRQTKQATTL ICLATQLHTI
AAGNMTPAYT QRDGQLRPVY IYAVDVAEFT LNKLRDRGSL EVTTIVANVQ DFLVNVNNNL
NE