| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_4874 |
|---|
| Symbol | |
|---|
| ID | 7261903 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | + |
|---|
| Start bp | 5197427 |
|---|
| End bp | 5198626 |
|---|
| Gene Length | 1200 bp |
|---|
| Protein Length | 399 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 643564784 |
|---|
| Product | ATPase |
|---|
| Protein accession | YP_002461304 |
|---|
| Protein GI | 219670869 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1373] Predicted ATPase (AAA+ superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCCTTA GACCGCTCTA TATGAACACG CTGAAAGAAT ACCGAGACGT TCCGCTTGTC
AAGATACTTG CGGGAATTCG CCGTTGCGGC AAATCCACCA TCCTGGCCAT GTTGCGGGAC
GACCTTTTGA AAAACGGCGT CCCTGCAGAT CATATCATCA GCATGCGCTA TACATCGGAG
GATTTTGATG ACGGCCTGAC CGATAAGCAG ATGTATAACG ATATAAAAGA ACAAATGAAT
GACAAAGAGC GCTATTATCT TTTGCTTGAT GAGGTGCAGG AGATAGCAGG GTGGGAAAAA
GCCATCAACA GCCTGCTTGA AGATTTCCAG ACGGACATCT ATGTTACCGG CTCAAATTCA
AAACTGATGT CAAGCGAAAT ATCCACCTAT TTGACAGGCA GATATATCTC TATCCCGGTG
TTTACCCTTT CCTTCGCCGA ATATCTGGAA TTCAAGAAAG AAAGCATGTT AGCGAAAAAA
GAGCTTTTGA ACGAGTACTT GCGCCTGGGG GGCTTTCCGA TTGTGGCTGC CGGCAGCTTT
GATGAGTCCT CCGCCTATCA GATCGTGGAA GGCATCTACC ATTCCGTGAT CACAAACGAC
ATCACCAAAC GGCACAACAT CACGAACTTC GATTTGTTCA GCCGTGTTGT AAACTATATC
CTTGAGAATG TCGGCAAAAC CTTTTCCGCA AATGCCATCG TCAAGTTCCT GAAAAGCGAG
GGGCGTGCTC TATCCGTTGA AACCGTATAT AACTATCTGC AGTGGCTGGA AAAGGCTTTT
GTCATCTATC GCTGCCAGCG CTATGATTTG CAGGGCAAGT CTGTATTAAA AACCCAGGAA
AAATTCTATC TTGCGGATAC CTCCCTCAAA TACTGCATCA TGGGATTCAA CCCGAAATCC
ATAGCCGCAA TGCTGGAAAA CATGGTTTAC TTTGAACTGC AAAGAAGAGG CTACAAGGTC
TATATCGGTA AAAACGCAAC AAAAGAAGTG GATTTCGTTG CGGTGCGGCG GGATGAGCGC
ATTTATATCC AGGTGTGCCG CCGGCTGCCG GAGGAGTCGG ACAGAGAGTT GGCAAATCTT
CTCGAAATAA AGGATCATTA TCCCAAGTAT GTTGTCACAC TGGACGAATT CGCCGCAGGC
AATATCAATG GCGTAAAATT TGTTCACCTG GCGGATTTCC TGTTAAGTAA CGAGTATTAA
|
|---|
| Protein sequence | MILRPLYMNT LKEYRDVPLV KILAGIRRCG KSTILAMLRD DLLKNGVPAD HIISMRYTSE
DFDDGLTDKQ MYNDIKEQMN DKERYYLLLD EVQEIAGWEK AINSLLEDFQ TDIYVTGSNS
KLMSSEISTY LTGRYISIPV FTLSFAEYLE FKKESMLAKK ELLNEYLRLG GFPIVAAGSF
DESSAYQIVE GIYHSVITND ITKRHNITNF DLFSRVVNYI LENVGKTFSA NAIVKFLKSE
GRALSVETVY NYLQWLEKAF VIYRCQRYDL QGKSVLKTQE KFYLADTSLK YCIMGFNPKS
IAAMLENMVY FELQRRGYKV YIGKNATKEV DFVAVRRDER IYIQVCRRLP EESDRELANL
LEIKDHYPKY VVTLDEFAAG NINGVKFVHL ADFLLSNEY
|
|---|
| |