Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_4846 |
Symbol | argS |
ID | 7261875 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | - |
Start bp | 5164179 |
End bp | 5165864 |
Gene Length | 1686 bp |
Protein Length | 561 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 643564757 |
Product | arginyl-tRNA synthetase |
Protein accession | YP_002461277 |
Protein GI | 219670842 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0018] Arginyl-tRNA synthetase |
TIGRFAM ID | [TIGR00456] arginyl-tRNA synthetase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000000272186 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGTTTAT ACATTAATAT TAAAGACACT ATCTATGCCA ATCTGGCCAA AGCTGCCCTG GAGGCCCAAA AGGCAGGTGA GCTTAGCTTT GAGAGCTTGC CTAATTATGT CTTGGAAGAG CCCCGGGAAA AGCAGCATGG TGATTGGGCA ACCAATTTAG CCATGGTCCT GACCAAGCAA GCCCGCAAAG CCCCCAGGGA TATCGCCACG ATTCTGATTA AGCATCTGGA CACTGAAGGA ACCTTCATTA CCGCCAGCGA AATCGCCGGT CCCGGATTCA TTAATTTCCG TTTGGATCCC AACTGGCTCA CAGGAGTCAT TCCCGAAGTG TTAAACCTGG AAGCAGACTA TGGAAAAGTA AACCTGGGCC AAGGGAAAAA AGTCCAGGTG GAATTCGTCA GCGCCAATCC CACCGGACTG CTCCATATGG GCAATGCCCG GGGTGCAGCC TTAGGGGATA GCTTAGCCGC TTTGCTGGCC ATGGCCGGTT ACGAAGTCAG CCGGGAATTC TACATTAACG ATGCGGGCAA CCAAATTTAT AACTTTGCCC TTTCCCTGGA AGCCCGTTAC CTTCAGCTCA TGGGTCAGGA TGTTCCTTTC CCTGAGGGAG GATACCACGG TGAAGATCTT ATCGACACCG TCAAAGGCTT AATCGAAAAA GTGGGGAATA AATACCTCAA TGTCGATCAG GATCTGCGCC GGGAATTTCT CGTCCGCTAT GCGCTGGAGG AGAAGCTGAC CAGTATCCGT GAAACCCTCA CCGATATGGG TGTTCACTAT GATTGTTGGT TCAGTGAGCA ATCCTTGCAT GACTCCGGAT TTGTTAAGGA CACCATGGAA AAGCTGGAGC AGCAGGGTTA TATCTATGAA AAAGAAGGGG CGCAATGGCT GAAATCCACC TTGTTCGGGG ATGAAAAGGA TGAAGTTGTG GTCCGTGGCA ATGGGACTCC CACCTATTTT GCCGCCGATA TTGCTTACCA TCGCAATAAA TTTGAACGGG GTTTTGACCG GGTCATCAAT ATTTGGGGCG CCGACCACCA TGGGCATGTG GCCCGTATGA AGGGAGCCAT GTCCGCCTTG GGATATGATC CTGAGAACCT CCAAATCATT TTGATGCAGC TGGTTCGCCT CATTCAGAAT GGCGAAGTGG TCCGTATGTC CAAGCGTTCC GGCCAATACA TTACACTAAG AGAACTGATG GATGAAGTCG GCAAGGATGC CGCCCGCTTC TTCTTTATCA TGCGGGATCC CGACTCTACC GTAGAATTCG ATTTGGATCT GGCTAAAGCA GAGTCTTCCG ATAATCCTGT CTACTATGTC CAATACGCCC ATGCGCGGCT GTGCAGCATT TTACGCCAGG CTGCCGAGCA GGGCTACAAT ACAGCGGGAA TACCCCAGGA AGGGGAGCTG AAGAGACTTC AGAGCAACGA AGAACGGGAG CTTCTGAAGA AGATTGCCGA ATTGCCTAAC GAGATCGAAG TAGCTGCCCG TCTGACAGAA CCACATCGTC TGGCCCGTTA TGTGCTGGAT CTGGCAGGGC TTTTCCACTC CTTCTATAAC AGCCAAAGAG TTTTGGTGGA TGAGGAAGGA TTGCGGGAAG CGCGTTTGGG CCTGGTTCGT TCTACCAAGC AGGTCCTGGC TAATGTTTTA GGCATCCTTG GCGTGACTGC TCCGGAAAGA ATGTAG
|
Protein sequence | MSLYINIKDT IYANLAKAAL EAQKAGELSF ESLPNYVLEE PREKQHGDWA TNLAMVLTKQ ARKAPRDIAT ILIKHLDTEG TFITASEIAG PGFINFRLDP NWLTGVIPEV LNLEADYGKV NLGQGKKVQV EFVSANPTGL LHMGNARGAA LGDSLAALLA MAGYEVSREF YINDAGNQIY NFALSLEARY LQLMGQDVPF PEGGYHGEDL IDTVKGLIEK VGNKYLNVDQ DLRREFLVRY ALEEKLTSIR ETLTDMGVHY DCWFSEQSLH DSGFVKDTME KLEQQGYIYE KEGAQWLKST LFGDEKDEVV VRGNGTPTYF AADIAYHRNK FERGFDRVIN IWGADHHGHV ARMKGAMSAL GYDPENLQII LMQLVRLIQN GEVVRMSKRS GQYITLRELM DEVGKDAARF FFIMRDPDST VEFDLDLAKA ESSDNPVYYV QYAHARLCSI LRQAAEQGYN TAGIPQEGEL KRLQSNEERE LLKKIAELPN EIEVAARLTE PHRLARYVLD LAGLFHSFYN SQRVLVDEEG LREARLGLVR STKQVLANVL GILGVTAPER M
|
| |