Gene Dhaf_4838 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_4838 
Symbol 
ID7261867 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand- 
Start bp5156672 
End bp5157313 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content52% 
IMG OID643564749 
Producttransaldolase 
Protein accessionYP_002461269 
Protein GI219670834 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0176] Transaldolase 
TIGRFAM ID[TIGR00875] fructose-6-phosphate aldolase, TalC/MipB family 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00000777517 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGTTTT TATTGGATTC AGCCAACCCG GAGGAGATCA GGCAGGCGTG GGCCATGGGA 
GTTATCGGAG GAATAACCAC CAATCCCAGC TTGGTGGCCA AAGAAGGCAG GGATTTTCAC 
CAGCTTCTGC AGGAACTTGT GCAGATTGTT AACGGCCCCA TCAGTGCTGA AGTAATTGCT 
TTAGATACCG AAGGAATGCT GGGGGAGGCC CGGGAACTTG CCGCCATGCA CCCCAATATC 
GTCGTCAAAA TTCCTATGAC GGAAGAGGGG CTCAAAGCGG TCAAGGTCCT GAAGGCCGAA 
GGCATTAAAA CTAATGTGAC CTTAGTTTTT TCAGCGGTGC AGGCTTTGCT GGCCGCTCGG 
GCGGGAGCCA CTTATGTCAG CCCCTTTCTG GGCAGACTGG ATGATATCGG TGAAAATGGA 
CTGCTTTTAC TGGCTGACAT TTGTGAGGTA TTTGGAGTCC ATGGACTGGA GACGAAAGTC 
ATCGCCGCCA GCATCCGCAA CCCCGTTCAT GTGACGGAAG CAGCCAAGAT CGGTGCGGAT 
TATGCCACCG TGCCCTTCAA TGTTTTGTGC CAGCTCTTTA AGCATCCCTT GACTGAGGCA 
GGCATTAAGA AGTTTTTAGC CGATTGGCAA AAGCTTAAAT AG
 
Protein sequence
MEFLLDSANP EEIRQAWAMG VIGGITTNPS LVAKEGRDFH QLLQELVQIV NGPISAEVIA 
LDTEGMLGEA RELAAMHPNI VVKIPMTEEG LKAVKVLKAE GIKTNVTLVF SAVQALLAAR 
AGATYVSPFL GRLDDIGENG LLLLADICEV FGVHGLETKV IAASIRNPVH VTEAAKIGAD 
YATVPFNVLC QLFKHPLTEA GIKKFLADWQ KLK