Gene Dhaf_4833 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_4833 
SymbolprfA 
ID7261862 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand- 
Start bp5152892 
End bp5153959 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content53% 
IMG OID643564744 
Productpeptide chain release factor 1 
Protein accessionYP_002461264 
Protein GI219670829 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0216] Protein chain release factor A 
TIGRFAM ID[TIGR00019] peptide chain release factor 1 


Plasmid Coverage information

Num covering plasmid clones3 
Plasmid unclonability p-value0.000000000263816 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAGAA AATTAATTGA AATTGAAAGG CGCTATGACG AGCTGACCCA GCTCTTAAGC 
GATCCTGAGG TCATCGGCAA CCAGAGCGAA TGGCAAAAAT ATGCCAAAGC TCAAGCGGGA 
ATGACGGATA TTGTGGAAGC CTTCCGTGAG TATTCTGAAG TTGTGAAACA TCTGGAAGAG 
ACACAGGGAC TGCTTGAGGA AAAGTTAGAC CCTGAATTTA AGGAAATGGC TGAGCTGGAG 
CTTGAGGAAC TCACCGAAAA GCGGGATGAG CTGGAAGAGA AAATGAGAAT TCTGCTCTTG 
CCCAAAGACC CTAATGATGA TAAAAACGTC ATTATGGAAA TCCGTGCCGG TGCGGGGGGC 
GAAGAGGCGG CGCTTTTTGC CGGGGATCTC TATCGCATGT ACACCAAATA CGCTGAACAC 
CAAGGCTGGC GCACAGAGCT TTTAAGCGCC AGTTACACCG ATATCGGGGG CTTTAAAGAA 
ATTATTTTCC TTATCGAAGG ACAAGGAGCT TATAGCAAGC TGAAGTTTGA AAGCGGCGTT 
CATCGGGTGC AGCGGGTACC CACGACAGAG TCCGGCGGCC GGATTCATAC CTCCACCACC 
ACGGTGGCGG TGCTTCCCGA GGCGGAAGAA GTGGATGTTG CCATCAACCC CAACGATTTG 
CGCATTGATA TCTTCTGCTC CAGCGGTCCC GGGGGACAGT CGGTCAATAC CACTCAATCC 
GCGGTTCGCA TCACCCACGT TCCCACAGGT ACTGTTGTCT CCTGCCAAGA CGAGAAGTCT 
CAGCTGAAGA ACAAAGAAAA AGCCCTGCGG GTTCTGCGGG CCCGTCTCCT GGAGCGTGCT 
CAGGAAGAGG CTATGGGCGA ATTGGCCAGT GAGCGCCGCA GTCAGGTGGG AACCGGGGAT 
CGCAGTGAGC GAATCCGCAC CTATAACTTC CCTCAAGGCC GGGTGACAGA CCACCGTATC 
GGCTTGACCC TCCATCGCCT GGATTCCATC TTGTTAGGAG AGCTGGATGA GGTGATCAAT 
GCCTTGATTA CAACGGATCA AGCCGAGCGT CTGAAATCGG AGGCATAA
 
Protein sequence
MQRKLIEIER RYDELTQLLS DPEVIGNQSE WQKYAKAQAG MTDIVEAFRE YSEVVKHLEE 
TQGLLEEKLD PEFKEMAELE LEELTEKRDE LEEKMRILLL PKDPNDDKNV IMEIRAGAGG 
EEAALFAGDL YRMYTKYAEH QGWRTELLSA SYTDIGGFKE IIFLIEGQGA YSKLKFESGV 
HRVQRVPTTE SGGRIHTSTT TVAVLPEAEE VDVAINPNDL RIDIFCSSGP GGQSVNTTQS 
AVRITHVPTG TVVSCQDEKS QLKNKEKALR VLRARLLERA QEEAMGELAS ERRSQVGTGD 
RSERIRTYNF PQGRVTDHRI GLTLHRLDSI LLGELDEVIN ALITTDQAER LKSEA