Gene Dhaf_4829 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_4829 
Symbol 
ID7261858 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp5149864 
End bp5150310 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content57% 
IMG OID643564740 
Productprotein tyrosine phosphatase 
Protein accessionYP_002461260 
Protein GI219670825 
COG category[T] Signal transduction mechanisms 
COG ID[COG0394] Protein-tyrosine-phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.00563012 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGAATTG TATTTGTTTG TACCGGCAAT ACATGCCGGA GCCCCATGGC TGAAGGTTTA 
GCCAGGGAGA TTTTGGGAGC GGATATCCAG GTGGAGTCCG CAGGTTTAGC AGCTTGGGAG
GGAGAGCCTG CCGCTGCCCA GGCGGTTCAG GTCTTAAAGG AAAAAGGCAT CGATCTCACG
TCACATCAAG CTCGCTTGGC TCGCAGGGAA ATCCTGGCTT CTGCAGATTG GATTATTCCC
ATGACCGGTG CTCACGAGGT GCAGCTTAAG GGGGCCTTCC CTGAGTTTGC CGCGAAAATC
AAGAGGTTGG GGCGCTGGGC CGGAGACGGA AAAGATCAGG ATATTCCGGA TCCCTGGGGC
GGAAGTGTGG AGCGGTACCG CCGGTGTGCG GAAGACATGG AGGTTTTGCT CCATAAGGTC
AAAGCAAGCC TGGAGGGGCG GCATTGA
 
Protein sequence
MRIVFVCTGN TCRSPMAEGL AREILGADIQ VESAGLAAWE GEPAAAQAVQ VLKEKGIDLT 
SHQARLARRE ILASADWIIP MTGAHEVQLK GAFPEFAAKI KRLGRWAGDG KDQDIPDPWG
GSVERYRRCA EDMEVLLHKV KASLEGRH