Gene Dhaf_4825 details

Gene Information

• Locus tag: Dhaf_4825
• Symbol: upp
• ID: 7261854
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfitobacterium hafniense DCB-2
• Kingdom: Bacteria
• Replicon accession: NC_011830
• Strand: -
• Start bp: 5146718
• End bp: 5147347
• Gene Length: 630 bp
• Protein Length: 209 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 643564736
• Product: uracil phosphoribosyltransferase
• Protein accession: YP_002461256
• Protein GI: 219670821
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0035] Uracil phosphoribosyltransferase
• TIGRFAM ID: [TIGR01091] uracil phosphoribosyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.0000000576364
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAAAAG TTCATATTCT GGATCATCCT TTGATACAGC ATAAATTATC CTTAATCCGA 
GACGAAAATA CAGGGTCCAA AGACTTTCGT GAACTGGTAG AAGAAGTTTC CATGCTTATG 
GCCTATGAAG TGACCCGGGA TTTTCCTCTG CAGGATGTGG AAGTAAAGAC CCCGGTGGCT 
ACGATGACAG CCAAGGCAAT AGCCGGACGC AAAGTCGGGT TGATTCCGAT CTTAAGAGCC 
GGTCTGGGCA TGGTGGATGG CATGCTGAGA TTAATCCCCA CCGCCAAAGT TGGCCATGTG 
GGGCTTTATC GGGATCCGGA AACACTGAAG CCGGTGGAAT ACTACTGCAA ACTCCCTACC 
GATGTGGAAG AGCGTGATTT GATCGTCATT GATCCTATGC TGGCTACGGG GGGATCGGCT 
ACGGCAGCCA TCACCTTTCT GAAAGACAGG GGAGCAAAAA GCATCAAGCT GATGTGCCTG 
ATCGCTGCTC CGGAAGGGAT CAAAGAAGTT CAGAACTACC ATGACGATGT GGATATTTTT 
GTGGCGGCAG TGGACGATTA TTTAAACGAC CACGGCTATA TCATTCCGGG TCTCGGTGAT 
GCCGGGGATC GGTTGTTTGG TACCAAATGA 

 

Protein sequence

MAKVHILDHP LIQHKLSLIR DENTGSKDFR ELVEEVSMLM AYEVTRDFPL QDVEVKTPVA 
TMTAKAIAGR KVGLIPILRA GLGMVDGMLR LIPTAKVGHV GLYRDPETLK PVEYYCKLPT 
DVEERDLIVI DPMLATGGSA TAAITFLKDR GAKSIKLMCL IAAPEGIKEV QNYHDDVDIF 
VAAVDDYLND HGYIIPGLGD AGDRLFGTK