| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_4786 |
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| Symbol | |
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| ID | 7261815 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | - |
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| Start bp | 5115476 |
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| End bp | 5117665 |
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| Gene Length | 2190 bp |
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| Protein Length | 729 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 643564697 |
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| Product | DNA topoisomerase III |
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| Protein accession | YP_002461217 |
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| Protein GI | 219670782 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | [TIGR01056] DNA topoisomerase III, bacteria and conjugative plasmid
[TIGR01057] DNA topoisomerase I, archaeal |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000000176541 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGAAAGA GTTTAGTTTT AACAGAAAAA CCCTCAGTGG GTCGTGATAT TGCCAAATTA
TTAGGCTGCA ATCAAAAAGG CAACGGCTGC TTCATCGGCT CCCGCTATAT CGTCACCTGG
GCCTTGGGGC ATCTGGTGAC CCTTGCCGAC CCGGAAGCTT ATGGAGAGAA GTATAAGCAG
TGGCGTCTGG AAGACCTGCC CATGCTCCCG AAAGATATGG AATTGGTGGT CATCAAGGAA
ACCTCCAAGC AATACGCCGC CGTCAAGCAG CTCCTGCGCC AGCCTGATGT GGAGGAACTG
ATTATTGCCA CCGATGCCGG CCGGGAGGGG GAGCTGGTGG CCCGTTGGAT TATCGGGAAG
GCCGGTTGGA AAAAGCCTAT CAAACGGCTC TGGATTTCTT CCCAAACGGA TAAAGCCATC
CGCGAAGGCT TTAATAATCT CAAACCGGGC AAGGCCTACG AATCTCTCTA CGCCGCTGCC
GAGTGCCGTG CTCAGGCGGA CTGGTATGTG GGCCTGAATG TCACACGGGC CCTGACCTGT
AAATACAATG CTCAGCTCTC GGCAGGAAGA GTGCAGACTC CCACCCTGGC TCTGGTAGTG
GAACGGGAGA AGGAGATTCA AAACTTTGTC CCTAAGGGTT ATTGGACGAT CAATGCCCGG
GTGCAAGGGT TTTCATTGAG CTGGCAGGAT AAGGGCAATG GCCAAAACAG AATGTTTGAT
CAGAGAAAAG CAGAACAGCT TGTGCAGAAG CTAAGGGGGC ATAAGGGCCA GGTTGCCGAG
ATCAAGAAAG AAGCGAAAAG GGAGCAGCCT CCCCAGGCCT ATGATTTAAC CGAACTGCAA
AGGGATGCCA ACCGAAAATA CGGATTCTCG GCCAAGCAAA CTTCATCCAT CATGCAGCAG
CTTTATGAAC AGCATAAGCT GGTCACTTAC CCCAGAACGG ATTCCCGTTA CCTTTCCGAG
GATATCGTCC CTACTCTTCC GGAACGGCTC AAGACCATTG CCGTAGGGCC TTACAGTGAA
CTGGCCCGCC GGGTTCTGCG CACCAAAATC ACCCCTACGA AACGATTGGT GGATAACTCG
AAAGTCACGG ACCATCACGC CATTATCCCC ACGGAACAAA CGGTGTTCCT CAATAAACTC
AGTCCGGAAG AGGCCAAAAT CTATGACCTG ATTGTGCGCC GCTTTATCGC GGTCCTGTCC
CCGGCCTTTG AATATGAGCA GACCACGGTT AAAGTGGAGA TTCAGGGAGA ACTGTTCACC
GCCAAAGGCA AAATCGTCAA ACAAAAAGGC TGGCGAAGTG TCTATGAAGG CAGGGAGGCT
GCTGACGAGG AGGCCGACCA TGAGGAGCAG GAACAAAATT TGCCGGATCT CCAGCCCAAG
CAGACCCTTG AAGTCCTTGA CCTGAAACTT TTGCCGGGCA AAACCAAGCC TCCCAAGCGC
TACACCGAAG CCACCCTCCT TTCGGCGATG GAACATCCCG GACAGCGGGT GAATGATGAG
GCCCTGCGGG AGACTCTGGA AAAAACCAGC GGTTTGGGCA CTCCGGCCAC CCGGGCCGAT
ATCATTGAAA AGCTCTTTAG TTCTTTCTAT ATGGAGCGCA ACGGCAAGGA AATCGTTCCT
ACTTCCAAAG GGATTCAACT GATTGGCTTG GTTCCTTCTG AGCTGAAATC TCCGGAGCTC
ACCGCCAAGT GGGAGCAGCA GCTCAGTGAA ATCAGCAAAG GGCGGGAAGA CCGGCAGCGT
TTCATCCAGG GGATCAAAAG CTATGCCACC CAGCTTGTCT CGGAAGTGTC CGGGAGCGGC
CGGACCTATC GCCATGACAA TATGACCCGG GCCAAGTGCC CGGAGTGCGG TAAATTTCTC
CTGCAGGTCA AGGGCAAACG CGGAGAAATG CTGGTTTGCC AGGATCGGGA GTGTGGTTAT
CGTCAGGGGC TTTCCGTACA ATCCAATGCC CGGTGTCCCC AATGCCATAA AAAAATGAAA
CTGCAGGGAG AGGGAGAGCA CAAGATCTTT ACCTGTGCCT GCGGATATCG GGAGAAACTG
TCCGCGTTTA ACAAGCGCCG GGAACAAGAA GGAAGCAAAG GCTCCTACAA TAAAAGGGAA
GTCAATCACT ATTTGCAGAA ACAGGAAAAG GACGCTCCTT TAAATACAGC GCTGGCTGAT
GCCCTTGCTA AATTAAATCT ACCCAAGTAA
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| Protein sequence | MGKSLVLTEK PSVGRDIAKL LGCNQKGNGC FIGSRYIVTW ALGHLVTLAD PEAYGEKYKQ
WRLEDLPMLP KDMELVVIKE TSKQYAAVKQ LLRQPDVEEL IIATDAGREG ELVARWIIGK
AGWKKPIKRL WISSQTDKAI REGFNNLKPG KAYESLYAAA ECRAQADWYV GLNVTRALTC
KYNAQLSAGR VQTPTLALVV EREKEIQNFV PKGYWTINAR VQGFSLSWQD KGNGQNRMFD
QRKAEQLVQK LRGHKGQVAE IKKEAKREQP PQAYDLTELQ RDANRKYGFS AKQTSSIMQQ
LYEQHKLVTY PRTDSRYLSE DIVPTLPERL KTIAVGPYSE LARRVLRTKI TPTKRLVDNS
KVTDHHAIIP TEQTVFLNKL SPEEAKIYDL IVRRFIAVLS PAFEYEQTTV KVEIQGELFT
AKGKIVKQKG WRSVYEGREA ADEEADHEEQ EQNLPDLQPK QTLEVLDLKL LPGKTKPPKR
YTEATLLSAM EHPGQRVNDE ALRETLEKTS GLGTPATRAD IIEKLFSSFY MERNGKEIVP
TSKGIQLIGL VPSELKSPEL TAKWEQQLSE ISKGREDRQR FIQGIKSYAT QLVSEVSGSG
RTYRHDNMTR AKCPECGKFL LQVKGKRGEM LVCQDRECGY RQGLSVQSNA RCPQCHKKMK
LQGEGEHKIF TCACGYREKL SAFNKRREQE GSKGSYNKRE VNHYLQKQEK DAPLNTALAD
ALAKLNLPK
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