Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_4785 |
Symbol | |
ID | 7261814 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | - |
Start bp | 5112083 |
End bp | 5115178 |
Gene Length | 3096 bp |
Protein Length | 1031 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 643564696 |
Product | molydopterin dinucleotide-binding region |
Protein accession | YP_002461216 |
Protein GI | 219670781 |
COG category | [C] Energy production and conversion |
COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAGGC GTGATTTCAT TAAATCCATG GCCGCCGTTG GGAGTGTTAC AGCCATTGGC TTAGGAATAG AAAAAATTCC CCGGGTCATC GCCGGCGAAG CCATCACCAA TCCTACACCT TATGATGGGG ATGCCCTGCC GGTAGAAATG AAAATCGATA AGGCCACCGG GGAAATCATT CTCAATCAGG ACGTTGCCTT AAAAAGCAGT GTCTGTCTGG GCTGTTGGAG CAATTGCGGC AATCGGGTGA AAGTGGATAA AAAAAGCGGC AAGATCCTGC GCGTAGTCGG TAATCCTTAC CATCCCAGCT GTGCCGAACC GCACCTCCCC TTTGACACTC CGCTGAAGGA GTCCTACCTT TCCTTGGGTC AGTACCAGGA GAATGGCCAC ACCCAAAGGG CCACGGTCTG CCAAAGAGGG AACTCCGCTT TCCAAATGGT CTATGAGCCC AACCGTATCC TCACTCCTCT TAAGCGGGCA GGTAAACGGG GCGAAGGGAA ATGGCAGCCC ATCACCTGGG AGCAGGCTTT AGAAGAAACC ATCGAAGGGG GCCGGCTTTT TTCCGAGCTG GGAGAAAGTC AAACCATTGA AGGTCTGCGG CAGGTTCGTG ACTTAGACAC CCCCATCTAT CCTGAGCAGC CGGGCTGGGG TGTAAAGGCC AACCAATTTG TCTTCATCGG TGGCCGGGAT GACGGACGGA CACCTTTCGC GAAGCGTTTT GTCAATAACG CCTATGGTTC CCCCAATCAT TTCGGCCATG GCGGTATCTG CGGAATCAGC CGCCGGGTTG CCTATCTGGC CTTCCTGGAT ACCTGGGATA AAAAACCCCA TATGAAGGCC GATTATATGG GAGCGGAGTT TATTATGTTC TTTGGCAATG CACCGGGTCA GGCTGGAGCT CCCTTTCAGC CTATGGCCCG GAAATCGGCT TTAGCCCAGG CTGAAAACGG CATGAAAGCG GTCATCGTCG ATCCCGTGCT CCAAAACGGC ATGTATAACT CGCCGAAGGC GGAGGAATCC TCCTGGGTAC CCATTCGTCC GGGGGGAGAC GGCGCCCTGG CTATGGCTAT GGTTCGTTGG GCCATTGAGA ATGAAAAATA CAATGAAAAC TATTTGCTAT CCCCCAGCAA GGAAGCGGCC CAGAAAAAGA AGTTCCCCTC CTGGACCAAT GCCACCTACC TGGTCATTCA GGAAGAAGGA CATGCCGACT ACGGGAAATT TCTCCTGGGA GAACAGATTG GCCTGGCCGA AAAGGCCGAT GAGACCAATC CCAATTATGT GGTTATCGAT CAAAAGTCCG GGGAGCCCAC TCTCTGTAAA GCTGCAGAGA ATGGCACCCT CTTCTACACC GGTAAAATCG CCCTTGGCGA TGCCATGGTT ACTGTGAAGA GTTCCCTGCA GATTCTCCGG GATGAAGCCA CTTCCTATAC CTATGAGGAA TATGCCAGGG AGTCAGGTTT AAGTCAGGAA CGGATCATCA GTTTAGCCAA GGAATATTTC AACCATGGCA CCAAAGCAGC CACGGATCAT CACGGCGGGG TATCCATGCA CTCCAACGGT TTTTATGGCT CCCTGGCTGT GGCGACCCTT AATGCTTTAA ATGGCAATAT CAATAAAAAA GGCGGCTCAA CCAAGAGCGG CGGCGGCTAT ATCGCCGATG ATGCGGGCAA ACGCTATGAT TTTGCCAAGG TCCCCGGAGG AGTCAAGCCC AAAGGGGTCA AAATCAGCCG GGAAGGAAAA GCCTATGAAG AGACTCCGGA ATACAAGGCC AGAAAAGCTA AAGGAGAAAA TCCCTATCCC GCTACCTTAC CCTGGAGTCC CTTAGCCGAT AGTTTGGAGG GTCATGTGAT TCCTTCCATG ATGGCCGGCT ATCCCTACAC CGCCAAAATC CTCATGATGT GGATGGCCAA TCCTCTCTAT GCCACTCCAG GGCTGTTCCA AAAGGATGTG GAGGATTTTC TTAAGGATCC GGAAAAGCTC CCCTTGATTA TTTCCATTGA CATTATGATG GGGGACTCCA CCCAATATGC AGACTATATT ATTCCCGATA CCACCTTCTA TGAAAGCTGG GGAGTGCCGA TCATCTGGAA TCTGGTCTTA AGCAAGGCCC ATGGGGCCCG CCGTCCCATC ATTGATCCTC TGGTCCCCAA GACCAAAGAG GGGCACCCCT ATTCCATGGA AGCCTATCTG ATTGAGATTG CCAAACGCCT GAATCTTCCC GGCTATGGAG AGAAGGGCAT TTTAGACGCG GAAGGAAAGC CCACCCCTTT GAACTCGGCA GCAGATTACT TCTTAAAGGC CATGGCCAAT ATCGCTTTTG ATGAAACCCC CATTGCCGAT ATTGCGGCGG AGGAATTAGC TCTCTCCGGC TTGGCAGAGG ATCTGAAGGA TGTAAAAGCC AGCCTTTCCC CAGAAGAGTG GCAAAAAGTC TATTATCTGC TGGCCCGGGG AGGACGTTTC GAGGATTATG TGAAGAACTA TGACGGGGAT AACCTGACCA ATAAATTCGG CAAAATCGTC AATATCTACA ATCAAAAACT GGGCACCAGC ATCAACTGTA TGACCGGCCG ATACAATCCC GGGACTGCTT GCTGGATTCC CCCTACTTTC GCCGACGGGA GAACCGTGGA TGAGGTCTAT CCCAGCCAGG AATGGCCCTT TATCGCCGTA TCCTATAAGC CCCGCTATCG CACCGGTGCC TGCCTGGACA ACGTTCCTCT GCTCAAGGGT CTGCAGGATA CCAATCACAT CGAAATGAAC CTTGAGGATG CCTCAGCCAT GGGCATTGCG ACAGGGGATA AGGTCAAGCT GATTACTCCC ACCGGGGAAG TGGAGGGTAT TGCCAAGGTC CGCCGGGGAG TGGGCAAAGG CTCCATCGGC ATCGAATACG GCTACGGACA TTGGGGCCAA TCCGGGGACC AGGGCTTCGA GATTGAGGGC AAAAAACGTG CCGGGGGCGC CAGGGATGGC AAAGGAATTC TTCTCAATCG CCTCGCTTTG CGGGATATCA GCTTAAAGAC CCCTCATCCC CTGGTGGATC TGGTAGGCGG CTCAATCGAT CGCAACACAG TTAAGGCAAA AATCGTTAAG CTCTAA
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Protein sequence | MKRRDFIKSM AAVGSVTAIG LGIEKIPRVI AGEAITNPTP YDGDALPVEM KIDKATGEII LNQDVALKSS VCLGCWSNCG NRVKVDKKSG KILRVVGNPY HPSCAEPHLP FDTPLKESYL SLGQYQENGH TQRATVCQRG NSAFQMVYEP NRILTPLKRA GKRGEGKWQP ITWEQALEET IEGGRLFSEL GESQTIEGLR QVRDLDTPIY PEQPGWGVKA NQFVFIGGRD DGRTPFAKRF VNNAYGSPNH FGHGGICGIS RRVAYLAFLD TWDKKPHMKA DYMGAEFIMF FGNAPGQAGA PFQPMARKSA LAQAENGMKA VIVDPVLQNG MYNSPKAEES SWVPIRPGGD GALAMAMVRW AIENEKYNEN YLLSPSKEAA QKKKFPSWTN ATYLVIQEEG HADYGKFLLG EQIGLAEKAD ETNPNYVVID QKSGEPTLCK AAENGTLFYT GKIALGDAMV TVKSSLQILR DEATSYTYEE YARESGLSQE RIISLAKEYF NHGTKAATDH HGGVSMHSNG FYGSLAVATL NALNGNINKK GGSTKSGGGY IADDAGKRYD FAKVPGGVKP KGVKISREGK AYEETPEYKA RKAKGENPYP ATLPWSPLAD SLEGHVIPSM MAGYPYTAKI LMMWMANPLY ATPGLFQKDV EDFLKDPEKL PLIISIDIMM GDSTQYADYI IPDTTFYESW GVPIIWNLVL SKAHGARRPI IDPLVPKTKE GHPYSMEAYL IEIAKRLNLP GYGEKGILDA EGKPTPLNSA ADYFLKAMAN IAFDETPIAD IAAEELALSG LAEDLKDVKA SLSPEEWQKV YYLLARGGRF EDYVKNYDGD NLTNKFGKIV NIYNQKLGTS INCMTGRYNP GTACWIPPTF ADGRTVDEVY PSQEWPFIAV SYKPRYRTGA CLDNVPLLKG LQDTNHIEMN LEDASAMGIA TGDKVKLITP TGEVEGIAKV RRGVGKGSIG IEYGYGHWGQ SGDQGFEIEG KKRAGGARDG KGILLNRLAL RDISLKTPHP LVDLVGGSID RNTVKAKIVK L
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