Gene Dhaf_4746 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_4746 
Symbol 
ID7261775 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp5070168 
End bp5071275 
Gene Length1108 bp 
Protein Length368 aa 
Translation table11 
GC content50% 
IMG OID643564657 
Producthypothetical protein 
Protein accessionYP_002461177 
Protein GI219670742 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1186] Protein chain release factor B 
TIGRFAM ID[TIGR00020] peptide chain release factor 2 


Plasmid Coverage information

Num covering plasmid clones58 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATATTTG AATGGAAAAA AGAGCTGGAA AGTTTAGAAG TGCGCTTAGC AGATTTGAGG 
GTTTCACTTT GACGTCCCTC AGCGTGAGGA TAAAATCAGT ATTTTAGAGA TTGAACTGCA
AAGGCCGGAC TTTTGGGATA ATCCAGAAGG GGCGCAAAAA GTGATGCAGG AGCTTTCTTA
TCAACAGGAG AAAGTCAAAA CCTATTACAC CTTGCAGCAG CAGCTGGATG ATATGCTCAC
CCTCTATCAA ATGGCGGTGG AAGAAAAGGA TGAATCCCTG GAGCCTGAAC TTGAGGAAGG
AATCCTGGCT CTGCAGCAAC GGCTGGATGG TTTGGAGCTG GAGATTCTGC TCAGCGGTCC
CTATGATCGG AATAATGCCA TAGTTACCCT GCATGCGGGA GCCGGCGGCA CAGAAGCCCA
GGACTGGGTA TCCATGCTGT ATCGGATGTA TATCCGCTAT GGAGAACGCC ACGGTTATAA
AGTGGAAACC ATGGATTTCC TGCCCGGCGA TGAAGCAGGG ATTAAGAGTG CGACCTTATC
CTTTGCGGGA GAAAATGCCT TCGGCTATTT GAAAGCGGAG AAAGGGGTTC ACCGTTTAGT
GCGGATATCT CCCTTTGACG CTTCGGGACG CCGTCATACC TCTTTTGCCT CTGTGGATGT
TATACCTGAG GTGATGGAGG ATAATGCTGA AATTCAGATT CCGCCCGAAG ATCTCAAGGT
GGATACCTAC CGGGCCAGCG GTGCGGGGGG ACAGCATGTC AATAAGACCA GTTCTGCGGT
CCGGATCACT CACTTACCCA CGGGGATTGT GGTCCAGTCC CAAAGTGAGC GTTCTCAGAT
TCAGAACAGG GCCTACTGCT TGCGCATCCT GCAAGCCAAG CTCCTGGAGC TGAAGCGCAA
ACAGCAGGAA GATGAAATTT CGGAGATTCG CGGGGAACAA CAGGAGATCG CGTGGGGAAG
CCAGATTCGC TCCTATGTGT TCCATCCTTA TAATATGGTT AAGGATCACC GGACCAATGA
GGAAACAGCG AATACCGGAG CTGTCATGGA CGGAGAGATT GACCAGTTTA TCGCTGCTTA
TCTGCAAAAG ACCAAAGCTG TTCAGTAA
 
Protein sequence
MIFEWKKELE SLEVRLADLR VSLDVPQRED KISILEIELQ RPDFWDNPEG AQKVMQELSY 
QQEKVKTYYT LQQQLDDMLT LYQMAVEEKD ESLEPELEEG ILALQQRLDG LELEILLSGP
YDRNNAIVTL HAGAGGTEAQ DWVSMLYRMY IRYGERHGYK VETMDFLPGD EAGIKSATLS
FAGENAFGYL KAEKGVHRLV RISPFDASGR RHTSFASVDV IPEVMEDNAE IQIPPEDLKV
DTYRASGAGG QHVNKTSSAV RITHLPTGIV VQSQSERSQI QNRAYCLRIL QAKLLELKRK
QQEDEISEIR GEQQEIAWGS QIRSYVFHPY NMVKDHRTNE ETANTGAVMD GEIDQFIAAY
LQKTKAVQ