| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_4739 |
|---|
| Symbol | |
|---|
| ID | 7261768 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | - |
|---|
| Start bp | 5063460 |
|---|
| End bp | 5064647 |
|---|
| Gene Length | 1188 bp |
|---|
| Protein Length | 395 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 643564650 |
|---|
| Product | carboxyl-terminal protease |
|---|
| Protein accession | YP_002461170 |
|---|
| Protein GI | 219670735 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0793] Periplasmic protease |
|---|
| TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATTTGC AGGAGAGTCG TTGGAAAGAG TATTTAAAAA ACCTGGGATG GGTTCTTGCC
ATAGGGAGTT TGATTTTTAC GGTGGTTGTC GGGGGGTTCA TTGTAACCAA CCTGGATCAT
TTAGGCCGCT TGGCAAGAGT AGTCAAGCTT GTTGAAAGTG ATTATTTGGA GGAAGTGTCT
GTAGACACCC TGATCGAAGG TGCCACCAAA GGAATTGTGG ATTCCTTGGG CGATCCTTAT
TCAAGTTATA TGAATGCTCA AGAGAATGAA GAGCTTATGC AACAAATCGA AGGGAAATTC
GGCGGCGTGG GGATTATTTT AAGTCTGAAA GATCCTCAGA AACTTGTGGT CCTAAGACCC
ATTAAAAACA CTCCGGCCGC TAAAGCCGGA CTACAGCCTG GAGATGTGAT TATTAAGATC
GATGATGTGG ACGCCACCAC CATCGATCAG GAAAAAGCCG TCTCCCTGAT GCGCGGGAAC
CCGGGGACTA ACGTGACTCT GGTGGTCTAT CGGGAAAGCA TTAAGCAGAA TGTGACCGTT
CCTTTAACCC GGGAAAATAT CGCAGTACCC ACGGTGGAGG GACTGGCTCT GCCAGGGAAT
TCGGATATAG CTTATATCGG AATTTCCCAG TTCTCCTCCC ATACAGCTCT TGAACTCAAT
GAAGTGCTGC GCAATATGGA TATCAGCAAA TACAAAGGGA TGATCTTGGA TTTACGCTAT
AATCATGGCG GGGAATTAGA ATCTGCTGTA GGAGTAGCCA GTTATTTTGT TCAGCCCGGC
CCCATTGTCT ATATTGTGGA TAAAGGAGGC AATGCTGTAA CCAAGGCTTC GGAAGGCAAT
TATTTAGGCA TTCCCTTTGT GGTTTTGGTC AATGAGGAAA GCGCTTCCGC AGCTGAAATC
GTTTCCGGGG CCATCAAAGA TCGGGGAACG GGCACCCTTG TGGGTACCAA GACCTTCGGT
AAAGGGATTG TGCAGACGAT TTATCAACTG GATAGGGGGA CCAGTGTGAA GCTGACCACC
GCCAAGTATT TGACCCCTAA TAAGATCGAT ATTCATAAAA AGGGCATCGA GCCTGATGTG
GAAGTGAAGC TGAAGGATGG AGAGGAAGCA ACTCTTTCTC CTACTACGAA AGCCTTTGAT
ACTCAGCTCA CGGAAGCTCT TAAGGTGCTT CGCCAACAGA TGAAATAA
|
|---|
| Protein sequence | MDLQESRWKE YLKNLGWVLA IGSLIFTVVV GGFIVTNLDH LGRLARVVKL VESDYLEEVS
VDTLIEGATK GIVDSLGDPY SSYMNAQENE ELMQQIEGKF GGVGIILSLK DPQKLVVLRP
IKNTPAAKAG LQPGDVIIKI DDVDATTIDQ EKAVSLMRGN PGTNVTLVVY RESIKQNVTV
PLTRENIAVP TVEGLALPGN SDIAYIGISQ FSSHTALELN EVLRNMDISK YKGMILDLRY
NHGGELESAV GVASYFVQPG PIVYIVDKGG NAVTKASEGN YLGIPFVVLV NEESASAAEI
VSGAIKDRGT GTLVGTKTFG KGIVQTIYQL DRGTSVKLTT AKYLTPNKID IHKKGIEPDV
EVKLKDGEEA TLSPTTKAFD TQLTEALKVL RQQMK
|
|---|
| |