Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_4696 |
Symbol | |
ID | 7261725 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | - |
Start bp | 5011148 |
End bp | 5013691 |
Gene Length | 2544 bp |
Protein Length | 847 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 643564608 |
Product | Trimethylamine-N-oxide reductase (cytochrome c) |
Protein accession | YP_002461128 |
Protein GI | 219670693 |
COG category | [C] Energy production and conversion |
COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
TIGRFAM ID | [TIGR00509] molybdopterin guanine dinucleotide-containing S/N-oxide reductases [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence [TIGR02166] anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0792872 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGAAATA TTCTTGAAGG TATTATTAAT AAACAAATAA ATCGCAGGAA TTTTCTAAAA GCCAGTGCCA TCGGCGCAGC CGGCCTGGCT TTACCCGGCT GCAGTTCCAG TACGCTCACC AATACCGGAG TTGACGCAAC GGCTGACGGC AATGAGGGTC AATGGATTAC GGCAGCTTGC TGGCATAACT GTGGCGGACG CTGTCTGAAC AAAGCTTTAG TGGTGGATGG AGTGGTTGTT CGGCAAAAAA CGGACGATAC CCATGAAGAT AGTCCGGACT TCCCTCAGCA AAGAGGCTGT GCCCGCGGCC GTTCTCACCG CAAAATGGTG ATGGGCGCCG ATCGTCTCAA ATACCCTATG AAACGCAAAA ACTGGGCGCC GGGGGGCGGC AACAAAGAAC TTCGCGGCCA AGACGAATGG GTGCGCATTT CTTGGGATGA AGCCCTTGAT ATTATGGCTT CTGAATTAAC GCGGATTAAG GATGCCTATG GCAACCGCGC CATTTTTGCA CCTGTAGGCG GCTCCGACAG TCTTCAAGCT GTGCCCCGTC TGCTCAGTGC TTTTGGCGGT TATACGGCCC GTTGGGGAAG TGTGTCCTGG GGATCATGGC CTACAGTCTA TTCCAAGGTT ACCGGCCAGC CTCACAACGG AGCCAGCGAC GGCAACGATC GTTTCCGCTT GAGAGAGTCC AAGCTGATCA TTCTCTGGGG AGCTAATCCC GCTCAATCCA GTCAGGGTTT GCCGGCTTAT AATTATCTGC AGGCCAAAAA AGCCGGGGTT AAATTTATCG TGATTGATCC CATTTACTCG GAATCGGCGA GAGTTTTGGC CGATGAATGG ATTCCGATCC GTCCGGCTAC AGACACAGCC TTGATCTTAG GTATGGCCTA CTACATCATT AAAAATAATC TGCTTGACCA AAATTTCCTG GATAACTGCA CAATTGGCTT TGATGCCGAT CACTTGCCGG AAGGTGCCGA TCCCAAAGAT AATTTCAAAG ATTATGTTCT GGGAACCTAT GACAATACGC CCAAGACTCC GGAGTGGGCT TCCGAAATCT GTGGTGTTCC TGCTGTCAAG ATCGCCGAAT TTGCCCAAGA GTATGCAACC ACGAAACCGG CGGCGATTAT TTCCGGCGGA GCCCCGGCCC GGATCAATAA TGGCGAGCAT TTGCCCCATG CCATGATGAC CTTGGCCTAT ATGGTAGGAA ACGTGGGTAT TCCCGGTGCC GGTGTCAGCC CGAATATGCA TAATTCGGCC ACCAACGCCG GACCGGCTTT GGTTAAAGCA GGAGGCAACG GTCTGCCGAA AATAGTCAAT CCCATTGATG ACAGTATCAA TAGCGGCGAA ATGTATGACG CCATTCTTAA TGGCAAATAC ATCAAGCAAA AAGGAGAAAT CAGAGACATC AACATCCAGA TGATTTGGAC CTGGTTCAGC CATAACCTTA ATCAAAGGGC AGGGTCCAGC CAGGGTATAG ATGCGTATCG GAAGGTTGAG TTCGTGGTCG CTCAGAACAT GTTTTTAACA GCTGACGCCC AATATGCCGA TCTGGTGCTC CCCGTGACCT CCGAATGGGA ACGGCTGGGC GGACTCCTGA CAGGCAACCG GGAAATCCTC ATCCATTATC GCCAGATTGT CGAGCCCCAA TATGAAGCCA AGAGTGATCT GTGGATTGTC AAGGAGATTG GCAAAAAGCT GGGCATCGAT CCGACGAAAG TTTGCCCCGT ATCTGAAGAA CAGCAAATGT ACAATCAGTT GGCAGGGGCT GAAGTCATCA AAGAAGACGG CTCAGGATAT GAAAAGCTGC TCACCCTGAC GGCTGAGGAT ATCAAGGTCT TGGGTGCCGA GGGCGAACCA CAGACCGGCC GCATCACTTA CCAGGAATTT AAGGAAAAGG GCATTTATCA AGTTCCCCGT CACAAAGGAG ATAAGTTGGA ATTTACCAGC TTTGAAGATT TTGTCGCCGA TCCTGCCAAT CATAAAGTAA ATACTCCCAG CGGTAAATTT GAAATTTACT GCAAGTCTTT GGCAGACAAT ATCGAAAAGG TGGGCTTCAC CAGCAAATCC CCCATTCCTA AATATGAACC TTCTGTGGAA GGTTACGAAG ATGGCCAGAA AAACGGCTAT CCCTTCCAAT TGATCACGAT TCATTACTTC AGAAGATCCC ACTCAACTCT GGATAATGTA ACCTGGCTCA GAGAGGCTTT CAACCAGGAA TGCCGCCTGA ATGCCCAGGA TGCGGCTGAA TTGGGAATCA AAACCGGCGA TATTGTCAAA GTGACCAGCC AGCATGGTTC TGTCATTCGC CCTGTCTATG TCACCGAAAC CATTACCCCC GGTGTCGTAT CCCTTGGGGA AGGGGCCTGG ATTGATATGG ATGAAGGCAA TGGCGTGGAT AAAGCAGGCT GTACCGGAAT TCTCAACGGG CCGATTGCCA CAGGTCAAGG CCACACCGGT TACAACTCCT GTAATGTGAA GGTGGAGAAA TACGATAAGC CCCTTGCCCT CGATGTCAAC TGGCCCCAAC GGATAATTTT ATAG
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Protein sequence | MGNILEGIIN KQINRRNFLK ASAIGAAGLA LPGCSSSTLT NTGVDATADG NEGQWITAAC WHNCGGRCLN KALVVDGVVV RQKTDDTHED SPDFPQQRGC ARGRSHRKMV MGADRLKYPM KRKNWAPGGG NKELRGQDEW VRISWDEALD IMASELTRIK DAYGNRAIFA PVGGSDSLQA VPRLLSAFGG YTARWGSVSW GSWPTVYSKV TGQPHNGASD GNDRFRLRES KLIILWGANP AQSSQGLPAY NYLQAKKAGV KFIVIDPIYS ESARVLADEW IPIRPATDTA LILGMAYYII KNNLLDQNFL DNCTIGFDAD HLPEGADPKD NFKDYVLGTY DNTPKTPEWA SEICGVPAVK IAEFAQEYAT TKPAAIISGG APARINNGEH LPHAMMTLAY MVGNVGIPGA GVSPNMHNSA TNAGPALVKA GGNGLPKIVN PIDDSINSGE MYDAILNGKY IKQKGEIRDI NIQMIWTWFS HNLNQRAGSS QGIDAYRKVE FVVAQNMFLT ADAQYADLVL PVTSEWERLG GLLTGNREIL IHYRQIVEPQ YEAKSDLWIV KEIGKKLGID PTKVCPVSEE QQMYNQLAGA EVIKEDGSGY EKLLTLTAED IKVLGAEGEP QTGRITYQEF KEKGIYQVPR HKGDKLEFTS FEDFVADPAN HKVNTPSGKF EIYCKSLADN IEKVGFTSKS PIPKYEPSVE GYEDGQKNGY PFQLITIHYF RRSHSTLDNV TWLREAFNQE CRLNAQDAAE LGIKTGDIVK VTSQHGSVIR PVYVTETITP GVVSLGEGAW IDMDEGNGVD KAGCTGILNG PIATGQGHTG YNSCNVKVEK YDKPLALDVN WPQRIIL
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