| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_4678 |
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| Symbol | |
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| ID | 7261707 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | + |
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| Start bp | 4991669 |
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| End bp | 4992997 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 643564591 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_002461111 |
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| Protein GI | 219670676 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.00314415 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGTTG AACCCTCTTC AGCCAAGGGC TTTCCTTTCT CCTTCTTCAG GAAGGGCCGG
ATGCCAGGAA TCAAAAAAAA CAACCAGAAA AATACCCGCA AGCGCAGGGT CATCATCTAC
GGAATCATTG CCGTCCTTGT TCTCGCCTCC GTGCTGGCTT CGAGCCTTAA GCCCCTTGCA
GGAACCGTGC TCACTGTGGA GCCCAAGGAA TTTGTCCGGG GATTTACGGA GGAGGGGCAG
GTTTTGGCGG CCCGGGAATG GCCTCTGTAC ACTTCTGTGG ATGGTAAAAT CATGGCTGTT
CATGTCCGGA ACGGCGATTC CGTGAGCAAA GGGCGGACCT TACTGGAACT GGATACCACC
GATTTGGTTT ATCAGTTGAC TGCTTTAAAA GCCCAGCTGC GAAGCGTGGA AGGCCAGCAT
CTCCAAACAA CCGGCGATCC CATAAAAGCC TTGGTACAGC AGCAAACCCT GCTTATTGAA
CAAGCTGAAC GGGATGCCCT GGCTCTTGAG CAAAGCCACA GCCGGATGAA GGCTCTCTTT
GACGCGGGGG CAATTCCCCT GACCCAATAT GAAGAAGCCC GGCTTCAGGC CGAAAAAGCC
CGGAACGTTT TAGAGCAACA AAAAGCTGCC CTGGCCTTGC TCTATGAGCA GCAATCCCTG
CCCGGAACAG AACAGATCTA TGCCGGCCAA AAAGATGCAC TGCAAGCACA AATCAGCCAG
CTTGAGGATC GGATTGGCAA AGCCAAGGTA ACGGCCCCGG AAGACGGTCT GATTAAAGAT
TCCCATCTCA AAGAAGGAGA ATTTGCCGCC GCCGGTCAAC TTCTCTTGAA TGTCTTTGCT
CCTAAAGGCT ACAAGGCGGA AGGCTATATC TTAGCCAAAG AGGCTCCCTC CATTAAGGCC
GGAGATCCTG TGGAGATCAT TCTGGATACT AATTCCGGGG ATCAAATTCT CAGCGGGGAC
ATCGAAAGTG TGGAGCCCTC AGCCGTGGAG CGCATTTCTC CCCTGGGGTT GAAAGAAAAC
CGGGTTAAAG TAACCGTCTT TCTCCACAGC GAGTCACCGG TAATTATTGG CAGCACGGTA
GATATTAAAT TTATCACCCA CCGGGCAGAG GCTCAGCTTA TGATCCCCAA AACCGCCCTC
TTCCCTTATG AAAACGGGGA GGCAGTCTGG GTTGTTGATG AGGGTAAAGC CCAGATCCGG
CCGGTGGTTA AGGGCATGGA AAACGACAAG GAAGTCATTA TCCTGGAAGG GCTTAACCCA
GGCGTTCAGA TACTTTTGGA TACCGATCTG GCCGGACTTA AGGAAGGCAA AAAGATCAAA
GCTCTTTGA
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| Protein sequence | MSVEPSSAKG FPFSFFRKGR MPGIKKNNQK NTRKRRVIIY GIIAVLVLAS VLASSLKPLA
GTVLTVEPKE FVRGFTEEGQ VLAAREWPLY TSVDGKIMAV HVRNGDSVSK GRTLLELDTT
DLVYQLTALK AQLRSVEGQH LQTTGDPIKA LVQQQTLLIE QAERDALALE QSHSRMKALF
DAGAIPLTQY EEARLQAEKA RNVLEQQKAA LALLYEQQSL PGTEQIYAGQ KDALQAQISQ
LEDRIGKAKV TAPEDGLIKD SHLKEGEFAA AGQLLLNVFA PKGYKAEGYI LAKEAPSIKA
GDPVEIILDT NSGDQILSGD IESVEPSAVE RISPLGLKEN RVKVTVFLHS ESPVIIGSTV
DIKFITHRAE AQLMIPKTAL FPYENGEAVW VVDEGKAQIR PVVKGMENDK EVIILEGLNP
GVQILLDTDL AGLKEGKKIK AL
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