| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_4666 |
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| Symbol | |
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| ID | 7261695 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | - |
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| Start bp | 4978306 |
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| End bp | 4979529 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 643564579 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_002461099 |
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| Protein GI | 219670664 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.00608192 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTGACT TGCAGACCTT ATTTATCATG ACGATATCTG TTCATTTTGT CATTGCCATA
TCGATGCTAA TCTACTGGAA AACCCAAAAA ACCTATCCGG GATTCGGCTA TTGGGCCATG
TCTAATGTGG TTGCCGCAGC ATTGTATGTT CTTACTGCAG CCAGACCGAT CTTACCTGTT
TTTGTATCCA TAATCGTGGG TAATATCGCA GCCATACTCG CGATAATGAT TCGGTATGAA
GGAGTCAGAG CCTTTACCGG CCAAACCGTT GCGACGAAGA AGAGAAATAT AGTGTCTTTG
CTTAGTATTT TCATCATCTT GGTTTATTTT ACCTATGTCG ATGATAATCC CTTAATGCGC
CTGTTCTTCC TTACGATCTG GCTTATCTAT TATGGAGGAT GCATTGCCAT TGGCATTCTT
AAAGGAGGAA CGATCTCTCA CAAATTAACA CCATGGATTA TCTCCATATC CCACGTTTTT
TGTGGTATTG TTTTAGTATT CCGCAATATT GTCTGGTTCT TGGATCCTTC TGCCCGCAAC
GCTCTTCAAC CGGTATTCAT TAATATTATG CTTGCTTTTA CAGAGCATAT CATGGACGTC
ATCGTGGCGA TGGCCTTCCT GATGCTCAAT AGCCAGAGAT TAGCCCAGGA ACTGTTTGAA
TCCCAAAAGG AGTTAGAAGA TCTGGCAACA ACAGATCCAC TGACCGGAAT AAGCAATCGT
CTTAAACTTA ACGAGCTTGG CAATAATGAG ATGATACGTT CACGAAGATT AAATCACCCT
TTTTCAGTTA TTGTCTTTGA TATTGACCAT TTTAAAGAGG TTAACGATAC CTGCGGCCAC
CCTATCGGTG ACAAATTACT TGTTGAATTA ACCCAAAAAA TCAAAGCTGA GATCCGGGAT
ATTGATTTTT TCGGCCGTCT GGGCGGGGAT GAATTCGTAT TGCTCTTTCC GGAAACCTCC
ATCCAAAAAT GTCATGCTGT TGCGGAGCGA TTGCGTCAGG TTACCAATGA TGTTGCCCTG
CAATTTGAGG ATATAAAGGT ACATGTAAGT ATTAGTCTGG GCATTGCGGA AATGACTCTT
GAAGACTCCA CTATAGAGGA CCTTCTGAAA CGTGCCGACG AAAATCTCTA TAAGGCTAAA
CACTCAGGCC GGAATATTAC CTTTGGCAAA GACGATTCTT TGGAATTATT ATCAAAAATA
TCTAAAGAAA AGCTGGAAAA CTAA
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| Protein sequence | MIDLQTLFIM TISVHFVIAI SMLIYWKTQK TYPGFGYWAM SNVVAAALYV LTAARPILPV
FVSIIVGNIA AILAIMIRYE GVRAFTGQTV ATKKRNIVSL LSIFIILVYF TYVDDNPLMR
LFFLTIWLIY YGGCIAIGIL KGGTISHKLT PWIISISHVF CGIVLVFRNI VWFLDPSARN
ALQPVFINIM LAFTEHIMDV IVAMAFLMLN SQRLAQELFE SQKELEDLAT TDPLTGISNR
LKLNELGNNE MIRSRRLNHP FSVIVFDIDH FKEVNDTCGH PIGDKLLVEL TQKIKAEIRD
IDFFGRLGGD EFVLLFPETS IQKCHAVAER LRQVTNDVAL QFEDIKVHVS ISLGIAEMTL
EDSTIEDLLK RADENLYKAK HSGRNITFGK DDSLELLSKI SKEKLEN
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