Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_4643 |
Symbol | |
ID | 7261672 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | - |
Start bp | 4951716 |
End bp | 4952747 |
Gene Length | 1032 bp |
Protein Length | 343 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 643564559 |
Product | TRAP dicarboxylate transporter, DctP subunit |
Protein accession | YP_002461079 |
Protein GI | 219670644 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTAGAA ATAACCGGCT CTTTATGCTA ATCATGATCC TTCTCTTATT ATCCGGATGC GGGACCCGGG TCATTGACGG TCAGCAGGTG GACAAAAAAG ATAAAATTAT CATCAAATTC TCTCACGTCG TTGAAGAAAA TACTCCCAAA GGGTTAGCCG CCATACGTTT TGCCAACCTG GTCAGGGAAC GGTCCAAAGG CATCATCGAA GTTCAGGCCT TTCCCAATTC TCAATTATTC AAAGATGGTG AAGAATTTGA GGCCTTAAGC AGGGGAGATG TGCAGATGAT CGCTCCTACC ACCTCAAAAG TTGCCCAATT ATTTCCCCAA TGGCAAATCT GGGATCTTCC CTACCTGTTT GATGATCTGG ACAGCGTCCA TCAAATCATG GATGGACCCT TGGGCAAAAC CCTGCTGGAT CAACTGCATC AGAAGAACAT GAAAGGTCTG GCCATGTGGG ATAACGGCTT CAAACACTTG ACCAATAACG ATCACCCTAT TACTAAACCC GGTGATTTAA AAGGATTAAC CTTCCGGATC ATGTCCCAGG GCATCCTGGA AGAACAATTT CACTCCTTTG GCGCCGCTAC CCTCTACCTG CCCTTCAATG ATGTCTATCA GTCTTTGGAG GAAGGACGGG CTCAAGGACA GGAAAACACC ATCTCCAATA TTTACACCAA GAACTTTGAC CAGGTACAGA GTTATTTAAC CCTCAGCCAG CACGGATTTA TGGGATATGC GGTCATGGTC AATGAAGATT TCTGGAATCA ACTGCCGGCC CAGGCCCGTG AACTCCTGGA GGAGACCATG GCGGAAGTGA CGCAGTGGGA ACGGGATATC GCCCAAAAGC TGAATGAGGA ACAATTAAGG GAACTGCAAA AGCGCAATCA GATCAAGATC TACACCCTGA ACAATGAAGA GAGAAACATC TGGCAAGAGG ACTTTGCTTT GGTTTATGCA AAATTTGCCC AAAAATGCGG CACAGACTTT CTCAATGACG TCAAAGAGTC CCTAGAATTG GCTGGGGAAT GA
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Protein sequence | MSRNNRLFML IMILLLLSGC GTRVIDGQQV DKKDKIIIKF SHVVEENTPK GLAAIRFANL VRERSKGIIE VQAFPNSQLF KDGEEFEALS RGDVQMIAPT TSKVAQLFPQ WQIWDLPYLF DDLDSVHQIM DGPLGKTLLD QLHQKNMKGL AMWDNGFKHL TNNDHPITKP GDLKGLTFRI MSQGILEEQF HSFGAATLYL PFNDVYQSLE EGRAQGQENT ISNIYTKNFD QVQSYLTLSQ HGFMGYAVMV NEDFWNQLPA QARELLEETM AEVTQWERDI AQKLNEEQLR ELQKRNQIKI YTLNNEERNI WQEDFALVYA KFAQKCGTDF LNDVKESLEL AGE
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