Gene Dhaf_4643 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_4643 
Symbol 
ID7261672 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp4951716 
End bp4952747 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content47% 
IMG OID643564559 
ProductTRAP dicarboxylate transporter, DctP subunit 
Protein accessionYP_002461079 
Protein GI219670644 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component 
TIGRFAM ID[TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAGAA ATAACCGGCT CTTTATGCTA ATCATGATCC TTCTCTTATT ATCCGGATGC 
GGGACCCGGG TCATTGACGG TCAGCAGGTG GACAAAAAAG ATAAAATTAT CATCAAATTC
TCTCACGTCG TTGAAGAAAA TACTCCCAAA GGGTTAGCCG CCATACGTTT TGCCAACCTG
GTCAGGGAAC GGTCCAAAGG CATCATCGAA GTTCAGGCCT TTCCCAATTC TCAATTATTC
AAAGATGGTG AAGAATTTGA GGCCTTAAGC AGGGGAGATG TGCAGATGAT CGCTCCTACC
ACCTCAAAAG TTGCCCAATT ATTTCCCCAA TGGCAAATCT GGGATCTTCC CTACCTGTTT
GATGATCTGG ACAGCGTCCA TCAAATCATG GATGGACCCT TGGGCAAAAC CCTGCTGGAT
CAACTGCATC AGAAGAACAT GAAAGGTCTG GCCATGTGGG ATAACGGCTT CAAACACTTG
ACCAATAACG ATCACCCTAT TACTAAACCC GGTGATTTAA AAGGATTAAC CTTCCGGATC
ATGTCCCAGG GCATCCTGGA AGAACAATTT CACTCCTTTG GCGCCGCTAC CCTCTACCTG
CCCTTCAATG ATGTCTATCA GTCTTTGGAG GAAGGACGGG CTCAAGGACA GGAAAACACC
ATCTCCAATA TTTACACCAA GAACTTTGAC CAGGTACAGA GTTATTTAAC CCTCAGCCAG
CACGGATTTA TGGGATATGC GGTCATGGTC AATGAAGATT TCTGGAATCA ACTGCCGGCC
CAGGCCCGTG AACTCCTGGA GGAGACCATG GCGGAAGTGA CGCAGTGGGA ACGGGATATC
GCCCAAAAGC TGAATGAGGA ACAATTAAGG GAACTGCAAA AGCGCAATCA GATCAAGATC
TACACCCTGA ACAATGAAGA GAGAAACATC TGGCAAGAGG ACTTTGCTTT GGTTTATGCA
AAATTTGCCC AAAAATGCGG CACAGACTTT CTCAATGACG TCAAAGAGTC CCTAGAATTG
GCTGGGGAAT GA
 
Protein sequence
MSRNNRLFML IMILLLLSGC GTRVIDGQQV DKKDKIIIKF SHVVEENTPK GLAAIRFANL 
VRERSKGIIE VQAFPNSQLF KDGEEFEALS RGDVQMIAPT TSKVAQLFPQ WQIWDLPYLF
DDLDSVHQIM DGPLGKTLLD QLHQKNMKGL AMWDNGFKHL TNNDHPITKP GDLKGLTFRI
MSQGILEEQF HSFGAATLYL PFNDVYQSLE EGRAQGQENT ISNIYTKNFD QVQSYLTLSQ
HGFMGYAVMV NEDFWNQLPA QARELLEETM AEVTQWERDI AQKLNEEQLR ELQKRNQIKI
YTLNNEERNI WQEDFALVYA KFAQKCGTDF LNDVKESLEL AGE