Gene Dhaf_4633 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_4633 
Symbol 
ID7261662 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand- 
Start bp4937825 
End bp4938889 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content41% 
IMG OID643564550 
ProductTRAP dicarboxylate transporter, DctP subunit 
Protein accessionYP_002461070 
Protein GI219670635 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component 
TIGRFAM ID[TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.00000302173 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAAAG GTATATTTTT AAGGAAACTG TTAGTTGTCT CATTAGTTGC CGGACTTTCT 
TTAGTTGGTT GTGGCGCTAA AGCGTCCAGT GATAGTGCAG GAGCCGGAAC CGAGCAGAAA 
GCCATGAAGA TGCGTTTGAC ACAAACCAAA TCGGATAATC ATCCTGTGTC CCAGGGGTAT 
GTTAAATTTG CGGAATTGGT TAAGGAAAAA ACGAATGGAC AAATTGTAGT TGACGTATTT 
AATAATGGTG TTCTTGGCAA TGACCGCGAA GGGGTCGAAG CCGCCCAGCA AGGAACAATA 
GAATTTGGGG GTTCATCCAC CCCGAACATG TCGAGCTTTA CCAATATTTT TACAGCTTGG 
GATCTGCCCT ATATTTTCCA AACAAAAGAA GATGTTTACA AAGTTGTCGA TGGCGAGCCG 
GGTCAATTGG CATCTCAGGA ACTGGAAAAG TCCGGTTTTA AGGTGGTAAT GTACCCGGAT 
TACGGATTCC GTCAATTTGT TAATAATGAA AAAGAAATTA AATTACCCGC AGATATGAAA 
GGTCTTAAAG TAAGAACCAC CAACTCACCG GTTGAACAGG CCGACTTTAA GGTATGGGGT 
GCTAATCCTA CTCCTATAGG CTGGACTGAA GTATATACCG CACTTCAGCA AAAAACCGTT 
GACGGCGAAG GGAATTCCTA TGGTTTACTT TGGGAGACAA AGCACCAGGA AGTTTTGAAA 
TTTGCTACCG AAATAAATTA TAACTATAGT TCCGACATTC TGGTCATGAA CAAAAAGATT 
TTCGACGGCT TAAGCCCTGA ATTGCAAAAG GCGATATTAG ATGCAGGAAA AGAAGCGGTT 
CAATGGCAAA GAGAGCTTGC CAATACGAAA GAAGAAGAAG CCAAAGAGAA TTTCAAAAAC 
TTTGGTATAA AAATTTATGA ACCTACCCCT GATGAGATGA AGCAATGGAA GGGGAGCGTT 
AAACCGGTCT GGGATGAGTT TATCGTCAAA GGTAAAGCGG ATCCGGAATA TGTTGACCTT 
ATTCTAAAAA CAATCGGCAA AACAAAGGAA GAAGTTTTTC AATAA
 
Protein sequence
MQKGIFLRKL LVVSLVAGLS LVGCGAKASS DSAGAGTEQK AMKMRLTQTK SDNHPVSQGY 
VKFAELVKEK TNGQIVVDVF NNGVLGNDRE GVEAAQQGTI EFGGSSTPNM SSFTNIFTAW 
DLPYIFQTKE DVYKVVDGEP GQLASQELEK SGFKVVMYPD YGFRQFVNNE KEIKLPADMK 
GLKVRTTNSP VEQADFKVWG ANPTPIGWTE VYTALQQKTV DGEGNSYGLL WETKHQEVLK 
FATEINYNYS SDILVMNKKI FDGLSPELQK AILDAGKEAV QWQRELANTK EEEAKENFKN 
FGIKIYEPTP DEMKQWKGSV KPVWDEFIVK GKADPEYVDL ILKTIGKTKE EVFQ