Gene Dhaf_4553 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_4553 
Symbol 
ID7261582 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand- 
Start bp4845067 
End bp4846056 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content50% 
IMG OID643564470 
Productprotein of unknown function DUF534 
Protein accessionYP_002460990 
Protein GI219670555 
COG category[R] General function prediction only 
COG ID[COG2984] ABC-type uncharacterized transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGA AATTTGCGGT GATGTTAAGC GGACTATTAG CCCTATCGTT ACTTCTCACA 
GGCTGTGGTT CGGCACAAGG AAAAGCGGAT AGCGGCAAAA AAACCGTAGG GATTGTGCAA 
ATTGTGGAAC ACCCTTCCCT GAATACCATT CGTGAGGCCA CGATTGCCGA ACTGGCAGCC 
CAGGGATTTA AAGATGGCGA AAACATCATC ATTGATTATA AAAATGCCCA AGGGGATCAA 
ACCAATCTCA AAACCATCGC CCAGCAATTT GTCAAAAATA ATTATGATTT GATCATTGCT 
ATCGCCACCC CCTCAGCCCA AGCGGTAGTC AGTGAGACCA AGGAGATTCC CATCGTATTT 
TCAGCAGCCA CCGATCCTGT GGGTTCAGGG CTTGTCAGCG ACATGGAAAA ACCCGGCGGC 
AATGTGACCG GCACCTCGGA CCGGGTTTCC GCCGAGAAGA TCATGGAATT GGCAGAGCAA 
ATCACCCCGG GGATCGAAAC CGTCGGAGCC CTGTACAACA CCAGTGAGAC CAATTCCGTT 
TCCGTAATCG ATAATCTCAA GGAATATGCT GCCCGGAAAA ATATCCAGGT AGTTGAGGCC 
ACAGTAACCA ATAGCTCCGA GGTGCTCCAG GCCGTCAATT CCCTGACCGG CAAAGCCGAT 
GCCATCTTCA TTCCGATCGA TAACGCTGTG GCCAGTGCCA TGCCCGCAGT AGCCCAATCC 
GCCAACAAAG CGCAAATCCC CGTTTATGTG GGAGCAGACT CCATGGTTAA AGACGGAGGC 
CTGGCCACTT ATGGCATCAA CTACACTGTG CTTGGTCAAG AAACCGCTAA AATGGCGGCC 
GAAATTCTCA ACGGGAAAAA ACCCGGCGAT ATCCCCGTAA AATCCATGAC CGATATGGAC 
ATTTACCTCA ATCAAAAAAC AGCCGATACC ATCGGCATAA CCATCCCGGA AGACGTTCTC 
CAGAAAGCTG CCGAGGTCTT TACCGAATAA
 
Protein sequence
MKKKFAVMLS GLLALSLLLT GCGSAQGKAD SGKKTVGIVQ IVEHPSLNTI REATIAELAA 
QGFKDGENII IDYKNAQGDQ TNLKTIAQQF VKNNYDLIIA IATPSAQAVV SETKEIPIVF 
SAATDPVGSG LVSDMEKPGG NVTGTSDRVS AEKIMELAEQ ITPGIETVGA LYNTSETNSV 
SVIDNLKEYA ARKNIQVVEA TVTNSSEVLQ AVNSLTGKAD AIFIPIDNAV ASAMPAVAQS 
ANKAQIPVYV GADSMVKDGG LATYGINYTV LGQETAKMAA EILNGKKPGD IPVKSMTDMD 
IYLNQKTADT IGITIPEDVL QKAAEVFTE