| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_4549 |
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| Symbol | |
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| ID | 7261578 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | - |
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| Start bp | 4841561 |
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| End bp | 4842220 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 643564466 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_002460986 |
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| Protein GI | 219670551 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.000000150922 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACTATA TTTTGCAAAT ACTGGGCCCC ATGTTAAACG GTACAGCAGT CACTTTAAAA
ATGTTCTTCG TCACCATCGT CATGTCCGTA CCCTTGGGAT TGATGCTTAG CCTGGGCCGT
ATATCCCGGT TTGGAGTGCT TCGCTCAGCG ATAGGGGTCT ATATATGGGT TTTTAGAGGC
ACCCCTCTCA TGCTTCAGCT CTTATTTGTC TATTTTGGCC TGCCCTTTAT TCCGGTTATT
GGGGAAATTC TTATTCTCAC AGATTTTCAA GCCGCCATAC TGGCTTTCGT CCTGAATTAT
GCCGCTTATT TTGCAGAAAT TTTCCGGGCG GGAATTCAGT CTATCGAACG TGGGCAATAT
GAGGGAGCCA GGGCTTTGGG CATGACCTAT GGTCAGCTCA TGCGCCGCAT TATCCTTCCT
CAAGTCGTTA AACGGGTACT GCCGCCGGTA AGCAATGAGA CCATCACCCT GGTCAAAGAC
ACCTCCCTGA TTTATGTACT GGCCATGAAT GATTTGCTGC GTACTACGAG AGCCCTGGTT
CAGAGAGACT TTACCATGAC CCCCTTTATC GTCGCCGGAG TGTTCTACCT GCTGATGACC
CTGGTTCTGA CCTGGGGCTT CCAAAGGCTT GAGAAACGCT ATGCGGCCTA TGATGAATAG
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| Protein sequence | MDYILQILGP MLNGTAVTLK MFFVTIVMSV PLGLMLSLGR ISRFGVLRSA IGVYIWVFRG
TPLMLQLLFV YFGLPFIPVI GEILILTDFQ AAILAFVLNY AAYFAEIFRA GIQSIERGQY
EGARALGMTY GQLMRRIILP QVVKRVLPPV SNETITLVKD TSLIYVLAMN DLLRTTRALV
QRDFTMTPFI VAGVFYLLMT LVLTWGFQRL EKRYAAYDE
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