| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_4547 |
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| Symbol | |
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| ID | 7261576 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | - |
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| Start bp | 4839766 |
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| End bp | 4840512 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 643564464 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_002460984 |
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| Protein GI | 219670549 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.00115443 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAAAAAT TTGTTCAGAT CTTTACCAAG CTGTTCATGA GCCATGCCCC TTTGATTCTC
TCCCTATTGG GTATCTTACT GTGGCTCTTA GCCTATTTTA TTTATTGGTT TTTCCCTCTG
CATCAGGCAC GCTGGGTTTG GCTGTCCGTC GTGGTCGTTT TAATTTTTAA TGGCATCTCC
CTGGGTGAAT TTGTTAAGAC TTTGGCGGTT AAGGGGTATA CAGACTCCAT GACGGGGTTG
CCCAATAAGG GTTTTATGTA CCTGCGCCTG AATATCGATA TGGAAAAATA CGCAAAGCAA
GAAAAAGAAT ACTCCCTGGC CATGATTGAT ATCGATCGCT TTAAGAATAT CAACGATACT
TATGGCCATC TTGCCGGGGA TAAGGTGATT AAGGAAGTCG CCGGGCTCCT GCGTAAAAAT
GTCAGGGCCA GTGATGAAGT CATCCGCTGG GGCGGCGAAG AGTTTGCGAT TTTATTGCCT
GAAACCAGCG AAGAGGGAGC GGCTAATCTC ATTGAGAGAA TCCGCAACCT TATGGAAAAT
CATGACTTTG GCCCGGAGAT AGCTTCCCAA AAAGTAACCT TTAGTGCAGG CGTGGTTTCT
TATAAGAAGC TGGAAGAAGT CAAAGCCAAA GAGAACAGGC TTACCAACAA TACGGATCTC
ATCGTAAATT TCTCCGACCA GGCTTTGTAC CAGGCCAAGA AGACCCGCAA TACCGTCTGG
CGCTTTAGTC AAGGGATTAT TGCTTAA
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| Protein sequence | MKKFVQIFTK LFMSHAPLIL SLLGILLWLL AYFIYWFFPL HQARWVWLSV VVVLIFNGIS
LGEFVKTLAV KGYTDSMTGL PNKGFMYLRL NIDMEKYAKQ EKEYSLAMID IDRFKNINDT
YGHLAGDKVI KEVAGLLRKN VRASDEVIRW GGEEFAILLP ETSEEGAANL IERIRNLMEN
HDFGPEIASQ KVTFSAGVVS YKKLEEVKAK ENRLTNNTDL IVNFSDQALY QAKKTRNTVW
RFSQGIIA
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