Gene Dhaf_4541 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_4541 
Symbol 
ID7261570 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp4831264 
End bp4833954 
Gene Length2691 bp 
Protein Length896 aa 
Translation table11 
GC content48% 
IMG OID643564458 
Productmulti-sensor hybrid histidine kinase 
Protein accessionYP_002460978 
Protein GI219670543 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGATTCCA GGCTGCATTT AGTGGATAAT CTCCCAGCCC TGCTCTGGAG CAGCGACCGG 
GCGGGAAACT ATGACTATGT TAATCAGGCC TGGTTGGAAT TCACAGGGCT GACCTTTGTG
GAAGTCCGTG GTGAGGGTTG GTTGAGCTGT GTTCATCCTG AAGATTCTCC GGGGGTCATG
AACGTGCTGG AGCATAGCCG CAGACATAAG GCGCCCTTTG AGGCGGAGTA CCGTTTGCGG
CGGTATGATG GGGAATACCG TCATTGCCTG AGCCGTGGTC AGCCTTATGA TGATCCTAAG
GGAGAGCTGG CCGGCTACAC CGGTGTGATC ATAGATATCA CAGAGCGCAA AGCAGCGGAA
ATCATGACAC GAGAAAACGC AGAAAAATTC AGGGAGATTT TTAATCGCAT TACGGACTGC
GTGTTTATCC ATGAAGTTAA GGATGATGGA CAGATCGGCA AAATTCAGGA AGTCAATGAT
ATGGCTTGTG AGCTTATTGG CTTGACCAGG GCGGAGATTA TCGATCTAAG CCGAGAGGTG
ATCAAAGTCA AGAGCCCTCT GACACTGGCC AATGAGTTCA CCCAGAAATT ATTGAGCAAA
AATTACCTGG TTTTTGAAGG AATGCTCTTG ACCCATCAGG GGAAGGAGAT CCCTGTGGAA
GTCAAGGCCC ATTACCATGT TTTGAACGGC CGCAGGATGC TGCTTTCCAT TGCCAGGGAT
ATCAGCAATC AAAAACGGAT CCATAAAATC TTATTGGCAA GCCATAATAA ATACCGCCAG
CTTTTTGATA ACATCACCGA TGCGGTTTTT GTCTATGAAC TGCAAAAGGA TGGCTATCCC
GGGCTGTTGA TCGAAATAAA CGAAAAAGCC AGGAGGCTTA TGGGTTATCA TGAAGAAACA
TTCATGTTTT CTGCAGGACC CTGTATCCGG CCATCCTCAC CTCAATTAAC CCTGGACGAC
GTGTGGCAAA GCCTGGAAAG AACCCATTCA GCAAGTTTCG AAGGGATCTG TACCAATCTG
GAGGGCGAGG ATATTCCCGT CGAAGTCAAT TGCCATACCT TCCCTTTAAA CGGCAGCAAG
GTGATGCTGA CCCTTCTTCG CGATATTACC GAGAGAAAGC AAATCGAACA GGAACGCAAA
CGGACTGAGG CGGAGTTTCA GCAGGCCAAG GAGAAGGCTG AAGCAGCCAA TCGGGCCAAA
AGTGAATTTC TGGCCAATAT GAGTCATGAA ATTCGTACAC CGATCAATGG GATCATCGGC
ATGATCGATC TCACCCTCTT AACCTCCTTA GAGAAGACCC AAAGGGAGAA TCTGAAGATT
GCCAAAAACT GCGCTTACTC TCTGTTCAAA ATCATCAATG ATATTTTGGA TTTTTCCAAA
ATCGAAGCCG GAAAACTAAC GGTTGAAGAG ATTGAATTTA ACCTTAAGGA AGTCATCGAA
CAGATTATCA AAACCCATAG TCCTGAAGCT GAACGCAAAG GTCTGGATTT GGCCTACACC
CTCTCGGCCA ACCTCCCCGA TTACTATAAA GGAGATCCGG AACGGATTAA GCAAGTCCTC
AATAACCTGC TGAGCAATGC TCTCAAGTTT ACCGAGCGGG GAGAGGTTTC CCTGGCGGTC
AAACGCCTGC AAGGGGACGA GGACGTTTCG GATTTAAAAT TTACTGTCAT GGACACGGGA
ATCGGCATAG CCGAAGAGGA TCAGCTGCAT CTTTTTGAAG AGTTTAACCA AGTGGACGGC
TCCATTACCC GCAAATATGG AGGAACCGGT TTAGGGTTAG CCATATCCAG AAAACTGGTT
GAAATGATGG GGGGAAGAAT CTGGGTCGAA AGTGAAAAAG GGAAGGGGAG TTCCTTTGGC
GTTGTTTTAA GGCTGAAACA TGGCGACAAA GACACGCTGC GCTTCAAGTC CACCCAGAAT
AACGATCAGT CAAGGGAAGG ATCAACCGCA AGGTCTTACC GAATCCTTTT AGCTGAAGAT
CATATCGTGA ATTCCATCGT CATCACGGAA ATGCTCAAAA TCCAAGGCCA TCGGGTGGAT
ATCGCCATGG ATGGAGAAGA GGCCTTAGCC CTTTATCACC AAAATCCTTA TGATGTCATC
CTGATGGACA TTCAGTTGCC CCGTCTGGAT GGGATCGAAG TGACGAAAAG AATTCGGGCA
AGTGAAGGGG CTCAAAGCCG CACTCCGATC ATTGCCTTAA CCGCCTACGC CTTGCAAGGG
GATCGGGAAG GATTTCTCCA GGCCGGTATG GATGAATACA TTCCCAAGCC CGTAATGATG
GAGGAACTGA TCATGGTCTT GGATAGAGTG GTGACCAAGT TCGCTTCCGG AGAGGGGCAA
GCCCAGCAGG AAGAGGTTGT TATTACCGAT GAGGGAGTCT ATCTCAAGGA TATATCCTCC
TTCCCGGAGA GCGTCAATAA GGACCTTGAA CTCAGCGAAA TGGCCTATGA TTTTAAAAAA
CTGCGCATCG CCCTCAACAA TGGCGACAGT GTCGCTCTGG AGCATATCGC CCATCGCATC
AAAGAACGGT GTTCCGTAAT CGGAGCCCAT AAATTAAAGG CCCTGGCCTT TAAGATTGAA
CTGGCCGCCC GACGTGGCAA TCCCGGGGAA GCAAAGGACT ATCTGCACGA TTTGGATAGT
GAATACAATC AATTGAGTGG AGGAATGTTG AATGAAAATA CTCGTAGCTG A
 
Protein sequence
MDSRLHLVDN LPALLWSSDR AGNYDYVNQA WLEFTGLTFV EVRGEGWLSC VHPEDSPGVM 
NVLEHSRRHK APFEAEYRLR RYDGEYRHCL SRGQPYDDPK GELAGYTGVI IDITERKAAE
IMTRENAEKF REIFNRITDC VFIHEVKDDG QIGKIQEVND MACELIGLTR AEIIDLSREV
IKVKSPLTLA NEFTQKLLSK NYLVFEGMLL THQGKEIPVE VKAHYHVLNG RRMLLSIARD
ISNQKRIHKI LLASHNKYRQ LFDNITDAVF VYELQKDGYP GLLIEINEKA RRLMGYHEET
FMFSAGPCIR PSSPQLTLDD VWQSLERTHS ASFEGICTNL EGEDIPVEVN CHTFPLNGSK
VMLTLLRDIT ERKQIEQERK RTEAEFQQAK EKAEAANRAK SEFLANMSHE IRTPINGIIG
MIDLTLLTSL EKTQRENLKI AKNCAYSLFK IINDILDFSK IEAGKLTVEE IEFNLKEVIE
QIIKTHSPEA ERKGLDLAYT LSANLPDYYK GDPERIKQVL NNLLSNALKF TERGEVSLAV
KRLQGDEDVS DLKFTVMDTG IGIAEEDQLH LFEEFNQVDG SITRKYGGTG LGLAISRKLV
EMMGGRIWVE SEKGKGSSFG VVLRLKHGDK DTLRFKSTQN NDQSREGSTA RSYRILLAED
HIVNSIVITE MLKIQGHRVD IAMDGEEALA LYHQNPYDVI LMDIQLPRLD GIEVTKRIRA
SEGAQSRTPI IALTAYALQG DREGFLQAGM DEYIPKPVMM EELIMVLDRV VTKFASGEGQ
AQQEEVVITD EGVYLKDISS FPESVNKDLE LSEMAYDFKK LRIALNNGDS VALEHIAHRI
KERCSVIGAH KLKALAFKIE LAARRGNPGE AKDYLHDLDS EYNQLSGGML NENTRS