Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_4541 |
Symbol | |
ID | 7261570 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | - |
Start bp | 4831264 |
End bp | 4833954 |
Gene Length | 2691 bp |
Protein Length | 896 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 643564458 |
Product | multi-sensor hybrid histidine kinase |
Protein accession | YP_002460978 |
Protein GI | 219670543 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGATTCCA GGCTGCATTT AGTGGATAAT CTCCCAGCCC TGCTCTGGAG CAGCGACCGG GCGGGAAACT ATGACTATGT TAATCAGGCC TGGTTGGAAT TCACAGGGCT GACCTTTGTG GAAGTCCGTG GTGAGGGTTG GTTGAGCTGT GTTCATCCTG AAGATTCTCC GGGGGTCATG AACGTGCTGG AGCATAGCCG CAGACATAAG GCGCCCTTTG AGGCGGAGTA CCGTTTGCGG CGGTATGATG GGGAATACCG TCATTGCCTG AGCCGTGGTC AGCCTTATGA TGATCCTAAG GGAGAGCTGG CCGGCTACAC CGGTGTGATC ATAGATATCA CAGAGCGCAA AGCAGCGGAA ATCATGACAC GAGAAAACGC AGAAAAATTC AGGGAGATTT TTAATCGCAT TACGGACTGC GTGTTTATCC ATGAAGTTAA GGATGATGGA CAGATCGGCA AAATTCAGGA AGTCAATGAT ATGGCTTGTG AGCTTATTGG CTTGACCAGG GCGGAGATTA TCGATCTAAG CCGAGAGGTG ATCAAAGTCA AGAGCCCTCT GACACTGGCC AATGAGTTCA CCCAGAAATT ATTGAGCAAA AATTACCTGG TTTTTGAAGG AATGCTCTTG ACCCATCAGG GGAAGGAGAT CCCTGTGGAA GTCAAGGCCC ATTACCATGT TTTGAACGGC CGCAGGATGC TGCTTTCCAT TGCCAGGGAT ATCAGCAATC AAAAACGGAT CCATAAAATC TTATTGGCAA GCCATAATAA ATACCGCCAG CTTTTTGATA ACATCACCGA TGCGGTTTTT GTCTATGAAC TGCAAAAGGA TGGCTATCCC GGGCTGTTGA TCGAAATAAA CGAAAAAGCC AGGAGGCTTA TGGGTTATCA TGAAGAAACA TTCATGTTTT CTGCAGGACC CTGTATCCGG CCATCCTCAC CTCAATTAAC CCTGGACGAC GTGTGGCAAA GCCTGGAAAG AACCCATTCA GCAAGTTTCG AAGGGATCTG TACCAATCTG GAGGGCGAGG ATATTCCCGT CGAAGTCAAT TGCCATACCT TCCCTTTAAA CGGCAGCAAG GTGATGCTGA CCCTTCTTCG CGATATTACC GAGAGAAAGC AAATCGAACA GGAACGCAAA CGGACTGAGG CGGAGTTTCA GCAGGCCAAG GAGAAGGCTG AAGCAGCCAA TCGGGCCAAA AGTGAATTTC TGGCCAATAT GAGTCATGAA ATTCGTACAC CGATCAATGG GATCATCGGC ATGATCGATC TCACCCTCTT AACCTCCTTA GAGAAGACCC AAAGGGAGAA TCTGAAGATT GCCAAAAACT GCGCTTACTC TCTGTTCAAA ATCATCAATG ATATTTTGGA TTTTTCCAAA ATCGAAGCCG GAAAACTAAC GGTTGAAGAG ATTGAATTTA ACCTTAAGGA AGTCATCGAA CAGATTATCA AAACCCATAG TCCTGAAGCT GAACGCAAAG GTCTGGATTT GGCCTACACC CTCTCGGCCA ACCTCCCCGA TTACTATAAA GGAGATCCGG AACGGATTAA GCAAGTCCTC AATAACCTGC TGAGCAATGC TCTCAAGTTT ACCGAGCGGG GAGAGGTTTC CCTGGCGGTC AAACGCCTGC AAGGGGACGA GGACGTTTCG GATTTAAAAT TTACTGTCAT GGACACGGGA ATCGGCATAG CCGAAGAGGA TCAGCTGCAT CTTTTTGAAG AGTTTAACCA AGTGGACGGC TCCATTACCC GCAAATATGG AGGAACCGGT TTAGGGTTAG CCATATCCAG AAAACTGGTT GAAATGATGG GGGGAAGAAT CTGGGTCGAA AGTGAAAAAG GGAAGGGGAG TTCCTTTGGC GTTGTTTTAA GGCTGAAACA TGGCGACAAA GACACGCTGC GCTTCAAGTC CACCCAGAAT AACGATCAGT CAAGGGAAGG ATCAACCGCA AGGTCTTACC GAATCCTTTT AGCTGAAGAT CATATCGTGA ATTCCATCGT CATCACGGAA ATGCTCAAAA TCCAAGGCCA TCGGGTGGAT ATCGCCATGG ATGGAGAAGA GGCCTTAGCC CTTTATCACC AAAATCCTTA TGATGTCATC CTGATGGACA TTCAGTTGCC CCGTCTGGAT GGGATCGAAG TGACGAAAAG AATTCGGGCA AGTGAAGGGG CTCAAAGCCG CACTCCGATC ATTGCCTTAA CCGCCTACGC CTTGCAAGGG GATCGGGAAG GATTTCTCCA GGCCGGTATG GATGAATACA TTCCCAAGCC CGTAATGATG GAGGAACTGA TCATGGTCTT GGATAGAGTG GTGACCAAGT TCGCTTCCGG AGAGGGGCAA GCCCAGCAGG AAGAGGTTGT TATTACCGAT GAGGGAGTCT ATCTCAAGGA TATATCCTCC TTCCCGGAGA GCGTCAATAA GGACCTTGAA CTCAGCGAAA TGGCCTATGA TTTTAAAAAA CTGCGCATCG CCCTCAACAA TGGCGACAGT GTCGCTCTGG AGCATATCGC CCATCGCATC AAAGAACGGT GTTCCGTAAT CGGAGCCCAT AAATTAAAGG CCCTGGCCTT TAAGATTGAA CTGGCCGCCC GACGTGGCAA TCCCGGGGAA GCAAAGGACT ATCTGCACGA TTTGGATAGT GAATACAATC AATTGAGTGG AGGAATGTTG AATGAAAATA CTCGTAGCTG A
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Protein sequence | MDSRLHLVDN LPALLWSSDR AGNYDYVNQA WLEFTGLTFV EVRGEGWLSC VHPEDSPGVM NVLEHSRRHK APFEAEYRLR RYDGEYRHCL SRGQPYDDPK GELAGYTGVI IDITERKAAE IMTRENAEKF REIFNRITDC VFIHEVKDDG QIGKIQEVND MACELIGLTR AEIIDLSREV IKVKSPLTLA NEFTQKLLSK NYLVFEGMLL THQGKEIPVE VKAHYHVLNG RRMLLSIARD ISNQKRIHKI LLASHNKYRQ LFDNITDAVF VYELQKDGYP GLLIEINEKA RRLMGYHEET FMFSAGPCIR PSSPQLTLDD VWQSLERTHS ASFEGICTNL EGEDIPVEVN CHTFPLNGSK VMLTLLRDIT ERKQIEQERK RTEAEFQQAK EKAEAANRAK SEFLANMSHE IRTPINGIIG MIDLTLLTSL EKTQRENLKI AKNCAYSLFK IINDILDFSK IEAGKLTVEE IEFNLKEVIE QIIKTHSPEA ERKGLDLAYT LSANLPDYYK GDPERIKQVL NNLLSNALKF TERGEVSLAV KRLQGDEDVS DLKFTVMDTG IGIAEEDQLH LFEEFNQVDG SITRKYGGTG LGLAISRKLV EMMGGRIWVE SEKGKGSSFG VVLRLKHGDK DTLRFKSTQN NDQSREGSTA RSYRILLAED HIVNSIVITE MLKIQGHRVD IAMDGEEALA LYHQNPYDVI LMDIQLPRLD GIEVTKRIRA SEGAQSRTPI IALTAYALQG DREGFLQAGM DEYIPKPVMM EELIMVLDRV VTKFASGEGQ AQQEEVVITD EGVYLKDISS FPESVNKDLE LSEMAYDFKK LRIALNNGDS VALEHIAHRI KERCSVIGAH KLKALAFKIE LAARRGNPGE AKDYLHDLDS EYNQLSGGML NENTRS
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