Gene Dhaf_4504 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_4504 
Symbol 
ID7261533 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp4787179 
End bp4788534 
Gene Length1356 bp 
Protein Length451 aa 
Translation table11 
GC content51% 
IMG OID643564421 
Productnucleotide sugar dehydrogenase 
Protein accessionYP_002460941 
Protein GI219670506 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0677] UDP-N-acetyl-D-mannosaminuronate dehydrogenase 
TIGRFAM ID[TIGR03026] nucleotide sugar dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.377712 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGCGTA TGAAAGAAGT CATTACCAGT GAAGATGTTT TAGCAAAGAA TCTAAAAGAC 
AAGCTCCAGG ACCATTCTGC AACAGTGGGG GTTATCGGTC TTGGTTATGT AGGACTCCCC
TTAGCCGTAG AAAAGGGAAA AGTAGGCTTC TCAGTCATCG GGTTTGATAT TAACGCCGCT
CGCGTAGCTA AAGTCAACGC CGGAGACAAT TACATCGCTG ATGTCAAAGA TGAGGAACTT
CTGGAACTGA CCCAAAAAGG AATGATCACA GCGACCACGG ATTACGCGAA ACTCGCTGAG
TGCGATGTGG TTGTCATCTG TGTCCCTACC CCTCTGACCA TCACCCGGGA TCCGGATATC
TCCTATATTC AGGCCTCTTC CGAGCAGATC GCCAAATACC TCAAGCCCGG ACAGCTGGTA
ACTTTAGAAA GCACCACCTA TCCCGGCACC ACTGAGGAAG TCATTCTGCC CATGCTGGAA
CAAAGCGGCC TTAAAGTGGG CAAAGACTTT TTCCTGGCCT TCTCACCGGA GCGGGTCGAT
CCAGGCAACA AACGCTTTAC CACCAACAAT ACCTCAAAAG TTGTGGGGGG TATGACCCCA
GTCTGTCTGG AAGTCGCCTA TACCTTCTAT GCTCAGACCA TCGTCAATGT GGTTCCCGTA
TCCTCACCGG CTGCCGCGGA GCTCACTAAA GTCTTTGAGA ATACTTACCG TGCCGTGAAC
ATCGCTTTGG TCAATGAGCT GATGCTGCTT TGTGATCGCA TGGGCATCGA TATCTGGGAA
GTAGTGGAGG CCGCAGGAAC CAAACCCTTT GGGATTCAAA CCTTCTGGCC CGGCCCGGGA
GTGGGCGGAC ACTGCATTCC TATCGATCCT TTCTACCTGA CCTGGAAAGC CCGCGAGTAC
GACTTCCACA CCCGCTTTAT CGAGCTGGCC GGCGAGATCA ATGTCGAAGT CTCCTACCAT
GTGATCAATA AAGTCATTCG TGCTCTCAAT AATGAAAATA AGAGCCTTAA GGATGCCAAA
GTTCTTATCC TTGGGGTAGC CTATAAAAAA GATATCGACG ATGTCCGTGA GTCACCGGCC
CTTAAGATCA TGGAGCTGCT CAGGAAAAAC GGAGCCAATA TCGCCTACCA TGACCCCTAT
ATCCCGGTTA TCGAGCCTCA CGGCGGCTCC ACAGTCCATC TGGAAAACAC TGAGCTGACC
GACGAAGCCC TGGCTGCTGC AGACTGCGTC CTCATCCTCA CCGACCACAG TGTTGTCGAC
TATGAGCGGG TCGCAGAAAA GGCCCCCCTC ATCGTGGATA CCCGCAACGC CACCAGAGGC
GTCGAGAACA ACAGAGAAAA GATCGTCAAA ATCTAA
 
Protein sequence
MLRMKEVITS EDVLAKNLKD KLQDHSATVG VIGLGYVGLP LAVEKGKVGF SVIGFDINAA 
RVAKVNAGDN YIADVKDEEL LELTQKGMIT ATTDYAKLAE CDVVVICVPT PLTITRDPDI
SYIQASSEQI AKYLKPGQLV TLESTTYPGT TEEVILPMLE QSGLKVGKDF FLAFSPERVD
PGNKRFTTNN TSKVVGGMTP VCLEVAYTFY AQTIVNVVPV SSPAAAELTK VFENTYRAVN
IALVNELMLL CDRMGIDIWE VVEAAGTKPF GIQTFWPGPG VGGHCIPIDP FYLTWKAREY
DFHTRFIELA GEINVEVSYH VINKVIRALN NENKSLKDAK VLILGVAYKK DIDDVRESPA
LKIMELLRKN GANIAYHDPY IPVIEPHGGS TVHLENTELT DEALAAADCV LILTDHSVVD
YERVAEKAPL IVDTRNATRG VENNREKIVK I