| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_4484 |
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| Symbol | |
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| ID | 7261513 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | - |
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| Start bp | 4765562 |
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| End bp | 4767193 |
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| Gene Length | 1632 bp |
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| Protein Length | 543 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 643564401 |
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| Product | N-acetylmuramoyl-L-alanine amidase |
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| Protein accession | YP_002460921 |
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| Protein GI | 219670486 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase
[COG2247] Putative cell wall-binding domain |
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| TIGRFAM ID | [TIGR02883] N-acetylmuramoyl-L-alanine amidase CwlD |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000000290327 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTGGCCAC GACGAAACAA ATGGAGCCTG GTCCTGGGTG CTGTCTTCAG CTTTTGGCTG
ATGGGGCAAG CCAGTGTTAA TGCCGCTCCC TTAACGGCAG AGGTAACGCG CATCTATGGA
GAGACACGCA TCGAGACAGC CATACGGATT GCTCAAGAAG GTTGGAGCGA GGCGAATACT
GTAATCTTAG CCCGCTACGA TGATTTTCCG GATTCTTTAG TTTCCGTGCC CCTCTCCAAA
CGTTATGACG CCCCCATTCT CCTGACGGCT TCCAAAGGTT TGGATGAAGG AGTCCTGGCG
GAAATCAAGC GGCTCGGAGC ACGGCATGTG ATTCTTTTGG GGGGCACGGG AGTTATGGGA
AATCCCATTA CCAAGGCTCT GGAAAAAGAG GAACTGACCT GGGAAAGAAT CGGGGGTGCC
GATCGTTACG AGACTGCAGC TCTGGTGGCG GAGCGCTTAG GCGGGAACGG TCAGGTGATT
CTCACCAGCG GAGAGAACTT TCCTGATGCT CTGGCTATCG GCCCTTATGC GGGGATTACC
GAAACGCCCC TCTTGCTTAC CAAAGCCAAA GAACTTCCCG AGGTCACCCG TCAGAAGCTG
GTGGAATTGG GGGCCTATCA GTTGAATCAG GAGTCGGAGG CCGTAACCAA GACCACAGTA
GTCGGGGGAG AAAAAGCGAT TTCTCCGGAA GCAGTGGCTG GGCTGACGGG AATGACCCGC
ATTGCGGGAG ATAACCGGTA TGAAACGGCG GCCAAAGCTT TCTGGTTTAC TCAAGAGGAA
TTTGGATCAG ACTTTGCGTC CGAAACCCAG AGAACTTTTT TAGTGACAGG GGAGAATTTC
CCCGACGCTC TGGTTACAGG CGCCTTAGCC GTTAAACAAA ATGCTTACTT ATTTATGGCC
TATCAGGAAG ACTTACCGGC GGTGACCTAC TCTGCTCTGG GCAATGCGGC AACGGCTCAG
GCTCAGCTCT TGGTTACCAT CATCGGCGGG GAAACCGTGC TTTCCGAACG GGTCAAAGGG
ATCGTGGAAG GAAGTATACA ACCTCCCTAC CTCCTGGCGG GACTCACGGT CGTAGTGGAC
CCGGGACATG GAGGCAAGGA CCCGGGGGCG TCGGGTCCCG GCGGGTCTCA TGAAAAGAAC
TCCACCCTGT CGGTGGGACT TTACTTAGCG GATCTTTTGC GGCAAGCCGG GGCGAAAGTC
GTCATGACAA GGACTGGAGA TACCTCCCCC GCCGGTGGTA GCTATACAGA ATTAAAAGAT
TTACAAGCCA GAGTAACCAT AGCGAATCAG ATTCCGGCGG ATCTTTACGT CTCTATACAT
AACGATGCCT TTTCCAACCC GGAAGCCGGT GGAGTGACCA CCTACGTCTC CGCAGAAAAT
CCTAAAGCCG AGGAGGGAAG AAAGCTTGCT TCCGCTGTTC AACAGGAATT GATTAAGCAG
GTGGGGCTCC AGGATCGCAA GGTTAAAACC GCTAATTTTT ATGTGATCAA GAATACCACC
ATGCCGGCCA TCCTTGTTGA ATTGGGCTTT ATCTCCAATC CGGTGGAAGA GAAACTCATC
AACGATCCGG AATTTCAGAG AAAATCTGCT CTGGGAATTT ACCGGGGGAT TCTCATTCAC
AGGGGATATT AG
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| Protein sequence | MWPRRNKWSL VLGAVFSFWL MGQASVNAAP LTAEVTRIYG ETRIETAIRI AQEGWSEANT
VILARYDDFP DSLVSVPLSK RYDAPILLTA SKGLDEGVLA EIKRLGARHV ILLGGTGVMG
NPITKALEKE ELTWERIGGA DRYETAALVA ERLGGNGQVI LTSGENFPDA LAIGPYAGIT
ETPLLLTKAK ELPEVTRQKL VELGAYQLNQ ESEAVTKTTV VGGEKAISPE AVAGLTGMTR
IAGDNRYETA AKAFWFTQEE FGSDFASETQ RTFLVTGENF PDALVTGALA VKQNAYLFMA
YQEDLPAVTY SALGNAATAQ AQLLVTIIGG ETVLSERVKG IVEGSIQPPY LLAGLTVVVD
PGHGGKDPGA SGPGGSHEKN STLSVGLYLA DLLRQAGAKV VMTRTGDTSP AGGSYTELKD
LQARVTIANQ IPADLYVSIH NDAFSNPEAG GVTTYVSAEN PKAEEGRKLA SAVQQELIKQ
VGLQDRKVKT ANFYVIKNTT MPAILVELGF ISNPVEEKLI NDPEFQRKSA LGIYRGILIH
RGY
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