| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_4476 |
|---|
| Symbol | |
|---|
| ID | 7261505 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | + |
|---|
| Start bp | 4749674 |
|---|
| End bp | 4751386 |
|---|
| Gene Length | 1713 bp |
|---|
| Protein Length | 570 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 643564394 |
|---|
| Product | Ig domain protein group 2 domain protein |
|---|
| Protein accession | YP_002460914 |
|---|
| Protein GI | 219670479 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2247] Putative cell wall-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 46 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAAA GATATTCAAG ATCTTTATTA TGTTTTTTGT TGGTTTTTTC ACTTTTATTT
ATAAGTATTC CCGTATTTGC GGATACTGCA TCCACATCAA TAAGTCTGGA TAAAAGCACG
ATAGTACTTA CCGTTGGCCA AACCGACACC TTAACTGCAA CCGTCCTTCC CGCAGGTACT
CCTACTCAAA ACCTAACCTG GATATCTTCC AATCCGAATG TAGTCAAAGT CTTTAATGGG
CTTCTTATGG CTCTCAATGA AGGAACCGCT TATATCAACG TTATGAATCC TTTCGGGAAC
AGTAATTACG CTTCATGTTA TGTTATTGTT AAGAAACCTG ATTCAACAAT GGAAATCAAT
AAAACATCTT CTGTTCTTAG CGTCGGTTCC ACAGAAACCT TAACCGTCAC TATTTCGCCC
AGTCAAGCAG TCCATTGGAC ATCCTCGAAT CCCGAGGTTG TTCAAGTGTT CAACGGAGTA
TTGATGGCTC AAAAGCTTGG CACAGCGGTG ATCACAGCAA CGGCAGCTGA CGGTTCGAAA
AGTGTAACAT GTACCGTCAC AGTCAATGAT GCTCCGGCCA CAATCACTTT AAATAAAAGC
AAGGCTACAT TATCTATCGG CAAATCCACG ACCTTAACTG CTAATATTGC GCCGGCGCTT
CCCTCCAATA CTTATTTAAT GTGGCAATCC TCTAACCCTG GTATAGTGTC TGTATCCGGA
GGCGTAATAA CGGGAGTCTC TTTAGGAAGT GCCGTTATTA CAGCCATTGC TTCTGACGGT
TCATGCAGTG CCACATGTGA AGTTACTGTA ACCGCCACAG GTATTAATGC TATCAGACTG
GGCGGAGCCA ACAGATATGA AACTTCAGTT CAAATCGCCA AACAAGGGTG GCCAAACGGC
TCAGCTTATA TCGTTTTGGC AACTGGGAAT AATTATCCCG ATGCCTTAAG CGCTGCTCCA
TTAGCTCTGA AATACAATGC TCCCATTTTA CTTACAGATA AAACACTTCC CCAAGTCACC
TTAAATGAAA TCACCCGTTT AAAGCCCACT CAAATCTTTA TCTGCGGCGG TACTGGTGCT
ATATCTAAAA CTATCGAAAA TCAACTCAAT GGTATGGGAA TCCTCACGGA AAGGCTTGAA
GGTAAGGATC GCTATGAAAC TTCTGTCGCT ATCGCTAGAA AATTAGGCTC GACGTCAGGA
GAGTTAGTGC TTGTTAACGG TTTTGAATGG TCCGATGCCT TATCCATCTC CCCCATTGCC
GCGAAAAAAG GCATCCCCAT CTTATTGACA GATAAAAGTA CCTTCCCTGA CTCTGTAAAA
TCATTTGTTA GCTCCAACAA CTTCTATACA ACCTATGTCC TGGGCGGTAC AGATCTCATT
AGCAATCAAG TTAAAAACCA ACTTCCCGGT TCAGAACGAA TCGATGGTGC TAACAAATAC
GAAAGAAACG TTAATATCCT TAAAAAGTTC GAAGATAGTC TGGATCTGGA AAAAATCTGC
ATCGCTACGG GGGCTGCTTT TCCCGATGCC CTCTCCGGCT CAGTGCTTGC AGCGAACCTG
TCCTCCGCTA TTGTACTGGT GGATAATAGT AGCCTAAAAT CCGTAACCAC TCAATATTCA
ACTAAGTCTC TCCAACAAGC TAATGATGTT TATGTGTTTG GACTCCAGGG CGTTGTCAGT
GACACTTTGG TCAATAAACT ATTTACCAGG TAG
|
|---|
| Protein sequence | MKKRYSRSLL CFLLVFSLLF ISIPVFADTA STSISLDKST IVLTVGQTDT LTATVLPAGT
PTQNLTWISS NPNVVKVFNG LLMALNEGTA YINVMNPFGN SNYASCYVIV KKPDSTMEIN
KTSSVLSVGS TETLTVTISP SQAVHWTSSN PEVVQVFNGV LMAQKLGTAV ITATAADGSK
SVTCTVTVND APATITLNKS KATLSIGKST TLTANIAPAL PSNTYLMWQS SNPGIVSVSG
GVITGVSLGS AVITAIASDG SCSATCEVTV TATGINAIRL GGANRYETSV QIAKQGWPNG
SAYIVLATGN NYPDALSAAP LALKYNAPIL LTDKTLPQVT LNEITRLKPT QIFICGGTGA
ISKTIENQLN GMGILTERLE GKDRYETSVA IARKLGSTSG ELVLVNGFEW SDALSISPIA
AKKGIPILLT DKSTFPDSVK SFVSSNNFYT TYVLGGTDLI SNQVKNQLPG SERIDGANKY
ERNVNILKKF EDSLDLEKIC IATGAAFPDA LSGSVLAANL SSAIVLVDNS SLKSVTTQYS
TKSLQQANDV YVFGLQGVVS DTLVNKLFTR
|
|---|
| |