Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_4427 |
Symbol | |
ID | 7261456 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | - |
Start bp | 4694749 |
End bp | 4696413 |
Gene Length | 1665 bp |
Protein Length | 554 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 643564348 |
Product | carboxyl-terminal protease |
Protein accession | YP_002460868 |
Protein GI | 219670433 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0793] Periplasmic protease |
TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.569103 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCAAAT TCAGTATGTT TTGCAGCAAG TTGATTAAAG CCAACACAAA AGCGGGAAGA ATCCTTACGG CTTCCGCTTT GGCCTTGATC TTAACCGTAT CCGCTCCGGC TGCGGCTTTA GGGAGTCCGG TAGACGATGT GCGATCCTTA TTGGAGAGCC AATATGTGGA TCCAGTGGAT CCCTGGGTGC TCAGCGCTTC CAGTGTTGAG GAAATGCTTA AGCGATTGGA CGATCCTCAC ACTGTCTTTT TTACGCAAAA AGAGTACCAG AATTTCCTTA ATTCCATGGA CTTAAGTTTT TCCGGGATTG GAGTATATAT TGAACTGGAG CCGCGGGGCT TAGAGATTGT CGGTATCATC CCGGGTTCAC CGGCTGAGGA GGCCAAACTC AAAACAGGGG ATATTATTGC TCAAGTCGGC GGCCAAAGCC TGGCGGGGCT TTCTCAAGAT GCGGCGACCA CTCTGATCAA GGGCCCCGAA GGGACCACTA TAGATATCGT GGTCCTGCGG GGAGAAGAGC GCCTCAGCTT AAAGGTGGCC CGGAGAGCGG TGGAAGTTCC TACCGTGAGC GGGGAAATGC TCAATGAAGA TATCGGCTAT GTGGCCATAG AGTCTTTTGG GGAGACCACT GAAGAACTAT TCGAGCAAGT GATTAAGGAG TTGGACAAAC AAGGGGCCGA TGCCTGGGTC ATGGATCTGC GCAATAATCC GGGCGGATAT TTGGACTCAG CCTTAAGCCT GGCAGGATAT TTCATTGGTG AACAGACAGC CTTGCAAACG AAAGACCGCT CACAGAAGTT TGAGCCTTAC CAGGCAGAAA AGCAGGAATT TATAATTGCT GAGCCGGTGA TATTCTTAAC CAATGAAAAC AGTGCCAGTG CTTCAGAGAT CCTGACGGCA GTGGTTAAGG ACTACCAAAA GGCAGTGGTG GTAGGAACCA ATACTTATGG CAAGGGCTCT GTCCAGAGCT TATGGCAGCT CACCGACGGG GATGTTCTGA AGATTACAGT GGCTAAGTTC TATTCTCCTT ATGGAAAAGA GATCAATGGG GTAGGGATTT CTCCCGATGT GGAGATTCTG GAAAATGATC CCCTGGAGAT GGCTGTATTG ATGTTGGCAG GATCTATTCA AGGGAATGAT GATGGACAGG AAGTCGCGGA CCTTGTTCAG TTCACCGCCG GGGGTAAGGA TTGGAACATT TCCCTTGAGG AAGCGAGGAA TCCTGAATAC TGGTCGGCTT ATCGGGAACT TATTCAAAAC AACTCCTTCC CCGGAGGATT TTCCTGGCGA CATAACTCAG ACTGGGCAGC GATTTCCCAG AGTGAACAAG ATGCCTTATG GCCTTTATTC TATCCGGGCT ATCATGGAAT GAAAGAGCTT AAAGATCTTG CCGTTGATAA GACCTTTACA GTGCGGTTTA CAGCTCCCAT CGATTTTAAG AGTGTGACCG AGAATTCTTT CGAACTGATT GAGAGTGAGA GCGGCAAGCG CATGCCTGTG ACCTTTGAGC AAGTGGATGA ACGTTCAGTT AAAGTGATTC CGCAAGGCCT TCTCGAACCG GAGAAAACCT ACTGGCTCCT TACCCATCAA GGAATTGCCG CTAAGGATGG CTCTATCCTG AAAGAAGGAG CGCTGACCGT CGGGACCACC GGGGCAGGTC ATTAG
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Protein sequence | MTKFSMFCSK LIKANTKAGR ILTASALALI LTVSAPAAAL GSPVDDVRSL LESQYVDPVD PWVLSASSVE EMLKRLDDPH TVFFTQKEYQ NFLNSMDLSF SGIGVYIELE PRGLEIVGII PGSPAEEAKL KTGDIIAQVG GQSLAGLSQD AATTLIKGPE GTTIDIVVLR GEERLSLKVA RRAVEVPTVS GEMLNEDIGY VAIESFGETT EELFEQVIKE LDKQGADAWV MDLRNNPGGY LDSALSLAGY FIGEQTALQT KDRSQKFEPY QAEKQEFIIA EPVIFLTNEN SASASEILTA VVKDYQKAVV VGTNTYGKGS VQSLWQLTDG DVLKITVAKF YSPYGKEING VGISPDVEIL ENDPLEMAVL MLAGSIQGND DGQEVADLVQ FTAGGKDWNI SLEEARNPEY WSAYRELIQN NSFPGGFSWR HNSDWAAISQ SEQDALWPLF YPGYHGMKEL KDLAVDKTFT VRFTAPIDFK SVTENSFELI ESESGKRMPV TFEQVDERSV KVIPQGLLEP EKTYWLLTHQ GIAAKDGSIL KEGALTVGTT GAGH
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