Gene Dhaf_4425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_4425 
Symbol 
ID7261454 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp4693294 
End bp4694154 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content49% 
IMG OID643564346 
Productcell wall hydrolase SleB 
Protein accessionYP_002460866 
Protein GI219670431 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3773] Cell wall hydrolyses involved in spore germination 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones67 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCCACACC GAAGATGCCG AAAAACCACG GCGATTTTCC TATGCTTGGT CATGACATTA 
TTCTGGTGTC AAGGAATGGT ATGTCCAGTC AATGGAGAAT TAGGTACGAA TACTTTTGAA
ATAGTGGATA TCGAAGTTTT GGATGCGGTC CAAATCGTTG ATCTCCAAGC AATGGGTGTC
AACCGCGGCG AAGCGGAAAA TAGGCTCAGG GAAACAGACA ATAGTCCCGC AATGGAAGAA
ACGGTAACAG AACAAGAGGA AGCTGCTCTC AGTGATGAAT TGGCTGTCCC AGAGGATGAA
CAGATGATCG TAGTACAGAG TGGAGATACT TTATCAGCAG TTGCTCATCG GTATGGAACA
ACGATTGCCG AACTGATGAA GCTCAATACG ATCAATGAAC CCAACACCAT CGGCGCAGGT
CAGACACTGC GCATTCCCGC TAAAGGAGAG ACAATAGCGG ATTCAGCCGC GGAACCATCC
CGCGGCAGAG CTCCGGTTAT TCAAGTTACT CAGGAAGAGT TGGAACTCCT GGCCCGTGTG
ATTCATGCTG AGGCAAGAGG GGAAGATTTT GAAGGACAAG TGGCGGTAGG GGCAGTGGTG
CTCAATCGGG TTGAGGATCA GCGTTTTCCC AATACGATCC ATGATGTAGT GTATCAGCCG
GGTGCCTTTA CGGCTGTCCT CGATAAGCAA ATCCATCTTA CCCCCAACCA AAGTGCTTAT
CGTGCGGCAG AGGCCGCTTT AAACGGCGAA GATCCCACCG GAGGGGCGAT TTATTATTAT
AACCCCAGGA CAGCCACGGA TCGTTGGATT AAGACCCGGC CTGTGGTAAA AACCATCGGC
AACCATACCT TTAGCATCTA A
 
Protein sequence
MPHRRCRKTT AIFLCLVMTL FWCQGMVCPV NGELGTNTFE IVDIEVLDAV QIVDLQAMGV 
NRGEAENRLR ETDNSPAMEE TVTEQEEAAL SDELAVPEDE QMIVVQSGDT LSAVAHRYGT
TIAELMKLNT INEPNTIGAG QTLRIPAKGE TIADSAAEPS RGRAPVIQVT QEELELLARV
IHAEARGEDF EGQVAVGAVV LNRVEDQRFP NTIHDVVYQP GAFTAVLDKQ IHLTPNQSAY
RAAEAALNGE DPTGGAIYYY NPRTATDRWI KTRPVVKTIG NHTFSI