Gene Dhaf_4394 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_4394 
Symbol 
ID7261423 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand+ 
Start bp4665798 
End bp4666868 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content54% 
IMG OID643564315 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_002460835 
Protein GI219670400 
COG category[C] Energy production and conversion 
COG ID[COG0437] Fe-S-cluster-containing hydrogenase components 1 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.768446 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAACA ACTTCTCCCG CCGTACTTTT CTCAAGCGGG CTACCGCAGC CGGCTTGCTG 
GGAGCATTGA CGGCGACCGG ACTAAGCGAT CCGGTTAAAG CCGCTGAGCA GCGCGGGGAA 
AAGCTTGGCA CCTTAATCGA CTTAACCCGA TGTGACGGCT GTCCAAACAG CCCGACTCCA 
CTTTGCGTAG CCGCCTGCCG CCAACACAAT CAAAGCCGAT TCCCGGAACC GCAAAAACCC 
CTCAAGTATT ATTGGCCTCA AAAAAAGGTG GAGGATTGGT CTGACAAGAG AGAACTTACT 
ACCCGCCTCA CTCCCTACAA CTGGACTTTC GTCGATAAAG TCAAGGTCGA GCATAACGGC 
CTCCAACACG AGATCCACGT GCCCAGGCGC TGTATGCATT GCGACAACCC AACCTGCCTG 
AAACTTTGCC CTTTCAGCGC TATTTCCAAA GAGAGCACCG GGGCTGTTTC CATTGATGAT 
GAAGTTTGTT TCGGGGGAGC AAAATGCCGT GACGTCTGCC CCTGGGGTAT CCCCCAACGC 
CAGGCGGGAG TGGGATTATA CCTCCAGATT GCTCCCGATT TAGCAGGGGG CGGGGTCATG 
TATAAATGTG ATCTCTGCAG CGACCTTTTA GCCGTAGGCA AGAAACCAGC CTGCATCCAG 
GCCTGTCCCC GGGAAGCCCT GACCATTGGC CCCCGTGAGG AGATTCAAGC CCTGGCCCGC 
AAGAAAGCCC AGGATATGGG CGGCTATGTG TATGGCGATC TGGAGAATGG AGGAACCTCC 
ACTCTCTACA TTTCCAGCGT TCCCTTCGAA AAAATTGACC AGGCTATAAA GGCTGATAAA 
AAACAAAAGG AAGATAATTC TCCCGGCCGG CCAGGTATGC CCGTTAAAGT GGATAATTAT 
CTTGAAAGCG AAAAGGGCTT ATTCTACAGC GCACTCCTGG CACCCTTTGC CGGAGCCGCC 
GCGGCCGGTA TCACTGCCTA TCGCACTTTG AAAGGTGATC AAAGCAACGG CACATCCCCC 
AACCCTGTCA ACCCAGGAGA GGAGGAAGAA CATGACCACA ACAACCCCTA A
 
Protein sequence
MNNNFSRRTF LKRATAAGLL GALTATGLSD PVKAAEQRGE KLGTLIDLTR CDGCPNSPTP 
LCVAACRQHN QSRFPEPQKP LKYYWPQKKV EDWSDKRELT TRLTPYNWTF VDKVKVEHNG 
LQHEIHVPRR CMHCDNPTCL KLCPFSAISK ESTGAVSIDD EVCFGGAKCR DVCPWGIPQR 
QAGVGLYLQI APDLAGGGVM YKCDLCSDLL AVGKKPACIQ ACPREALTIG PREEIQALAR 
KKAQDMGGYV YGDLENGGTS TLYISSVPFE KIDQAIKADK KQKEDNSPGR PGMPVKVDNY 
LESEKGLFYS ALLAPFAGAA AAGITAYRTL KGDQSNGTSP NPVNPGEEEE HDHNNP