| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_4389 |
|---|
| Symbol | |
|---|
| ID | 7261418 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | - |
|---|
| Start bp | 4659809 |
|---|
| End bp | 4660552 |
|---|
| Gene Length | 744 bp |
|---|
| Protein Length | 247 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 643564310 |
|---|
| Product | ribonuclease PH |
|---|
| Protein accession | YP_002460830 |
|---|
| Protein GI | 219670395 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0689] RNase PH |
|---|
| TIGRFAM ID | [TIGR01966] ribonuclease PH |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0000000316498 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCGTT TTGATGGCCG TGAGGCCTTT GAACTAAGAC CGGTTAAGCT GACCCGGGGA
TTTACCAATA TTCCTGAGGG CTCTGTGCTT ATCGAGGTTG GTCAGACAAG AGTGATTTGT
ACTGCTACCG TGGAAGAGAA GGTACCGCTC TTTAAAAAAG GCACAGGTTC AGGCTGGGTT
ACAGCAGAAT ATTCCATGCT TCCCCGAGCG ACTCAGACCC GGAATCCCCG TGAGTCCAGC
AAGGGTAAAC TGACGGGCCG GACCATGGAG ATTCAGCGTT TAATCGGGAG AGCTTTGCGC
TCGGTAGTGG ACCTTAAAAA ACTCGGAGAA AGAACCATCT GGCTGGATTG TGATGTGATT
CAGGCTGATG GGGGGACCCG GACCGCTTCC ATTACCGGAG CCTATGTGGC TTTAGTGGAT
GCGGTCAATC ACCTGTTGGC CAAAGGGCTG ATCAAAGAAA ACCCTATTCT CGACTCTCTG
GCCGCAGTTT CGGTAGGAAA AGTCGATGGT ATGGCCCTCC TGGATCTTGC CTATGAAGAA
GACTCCAAAG CGGAAGTTGA TATGAATGTG GTGATGACCG GGCAGGGGAA ATTTGTGGAG
ATTCAAGGAA CGGCTGAGGA TATTCCTTTT GGCCGGGAGG AATTGGATCA ATTTTTGGAG
TTGGCTGAGA AGGGTATTCA AGAACTTATG GGAATGCAAA AGGCTGCTGC GCAAGTGGGG
ACCGGCCCTT TGTCTCAAAA TTGA
|
|---|
| Protein sequence | MKRFDGREAF ELRPVKLTRG FTNIPEGSVL IEVGQTRVIC TATVEEKVPL FKKGTGSGWV
TAEYSMLPRA TQTRNPRESS KGKLTGRTME IQRLIGRALR SVVDLKKLGE RTIWLDCDVI
QADGGTRTAS ITGAYVALVD AVNHLLAKGL IKENPILDSL AAVSVGKVDG MALLDLAYEE
DSKAEVDMNV VMTGQGKFVE IQGTAEDIPF GREELDQFLE LAEKGIQELM GMQKAAAQVG
TGPLSQN
|
|---|
| |