Gene Dhaf_4388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_4388 
Symbol 
ID7261417 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp4659186 
End bp4659812 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content50% 
IMG OID643564309 
Productnon-canonical purine NTP pyrophosphatase, rdgB/HAM1 family 
Protein accessionYP_002460829 
Protein GI219670394 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0127] Xanthosine triphosphate pyrophosphatase 
TIGRFAM ID[TIGR00042] non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000000440325 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAAGCGG GTTGTTTTAT GAAGGTTTTG CTGGCGACAC AAAATAAGGG GAAAGTCAAG 
GAGCTTCAGG ATCTTCTTTT GGTCGAAGAT ATTGAGGTGC TTTCTTTAGG AGATCTGGGT
GAGTGGGAAG ATGTTGAGGA AACGGGGGCG ACCTTTGCGG AGAATGCGGC CATGAAGGCA
AGAATTGCGG CCCAGCGTAC AGGACTGGTA TCTCTTGCCG ATGATTCCGG TTTGGAAGTG
GATGCTCTCC AAGGGGCACC GGGAGTCTAT TCGGCCCGTT ATGCCGGAGA GCCAAAGGAT
GATGACAAAA ATAATGATAA GCTTCTTCAA GAATTGGAAG GGGTGCCGGA AGAACAAAGG
ACGGGGCGGT TTCGCTGTGC TTTGGTTATT GCCTGCCCCA CTGGGGAAGA GTATTTGACA
GAGGGAACGG TGGAAGGGCG CATTCTTAAT GAGCGTCGTG GCAAAGAAGG GTTTGGCTAT
GATCCGCTCT TTTATTTGCC CGATTTTGGC CGAACCATGG CTCAGCTGAA TCTAAGCCAA
AAGAATAAAA TCAGTCACCG GGCTCAGGCA TTCCGCCAGG CTGTTCCCAT ACTTAAAGAG
CTTGCCCAGC GGGATGAAGA CGCTTAA
 
Protein sequence
MKAGCFMKVL LATQNKGKVK ELQDLLLVED IEVLSLGDLG EWEDVEETGA TFAENAAMKA 
RIAAQRTGLV SLADDSGLEV DALQGAPGVY SARYAGEPKD DDKNNDKLLQ ELEGVPEEQR
TGRFRCALVI ACPTGEEYLT EGTVEGRILN ERRGKEGFGY DPLFYLPDFG RTMAQLNLSQ
KNKISHRAQA FRQAVPILKE LAQRDEDA