| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_4373 |
|---|
| Symbol | |
|---|
| ID | 7261398 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | + |
|---|
| Start bp | 4641047 |
|---|
| End bp | 4642246 |
|---|
| Gene Length | 1200 bp |
|---|
| Protein Length | 399 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 643564290 |
|---|
| Product | tryptophan synthase subunit beta |
|---|
| Protein accession | YP_002460814 |
|---|
| Protein GI | 219670379 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0133] Tryptophan synthase beta chain |
|---|
| TIGRFAM ID | [TIGR00263] tryptophan synthase, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 127 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTGCCA AAGACCAGGA TTTTACACCT CTGGCCAGCC GCTTCGGCAC TTACGGAGGT
GCTTATGTAC CCGAGACCCT CATTCCCGTT TTAGATGAAC TGGCAGAAGC TTATAACCAA
GTCCGCAATG ATCCCGGCTT TCAGAACGAT CTGAAAGAAC TCTTAGCCGA CTATGTAGGC
CGGCCTTCCC TCCTCTATTA TGCCCGAAGG CTCAGCGAAT CCCTGGGCGG AGCTCAGATC
TATCTCAAAC GGGAAGATCT CAATCATACC GGCGCTCATA AAATCAACAA TACCCTGGGC
CAAATTCTCC TGGCCAAGCG AATGGGCAAA ACCCGGGTCA TTGCGGAGAC AGGAGCCGGT
CAGCACGGAG TTGCCACCGC TACCGCCTGT GCCCTCATGG GCTTGAATTG TGTGGTCTAT
ATGGGAGAGA AGGATATAGA ACGGCAGCAT TTAAATGTCT TGCGCATGCA GATGCTGGGC
AGTGAAGTCC GCTCCGTCGC CACAGGCTCT AAAACCTTGA AAGACGCCAT CAATGAAGCC
TTAAGAGACT GGGTTGCCCA CCCCCGGGAC ACCTTCTACT GCTTTGGGAC CGCCGCCGGC
CCTCATCCCT ATCCAACTAT CGTCAGGGAT TTGCAAAGGA TTATTGGTGA AGAAACCCGC
TCTCAATTCC TAAGCCTCCG GGGACGTCTT CCCGATCTGC TCGTCGCCTG CGTGGGCGGC
GGGAGCAATG CCATCGGTTT TTTCCATCCC TTTCTGGCTG ATGAACATGT CCAACTGATT
GGGGTTGAAG CCGGTGGAAA AGGCCTGGGC AGTGGAGATC ACGCCGCGAC CTTATCCTTA
GGCCGTCCCG GCATCCTCCA TGGCGCTTAC AGCTATCTTT TGCAGGATGA AGAGGGCCAG
ATTCCCGACA CCCACTCCAT TTCAGCCGGT CTTGATTACC CCGGCGTGGG GCCGGAGCAT
AGCCACCTGA AAGACATTGA ACGCGCCCGC TATGTCAGCG TAACCGATAA CGAAACCCTG
GAGGCCAGTA AACTGCTTGC CCGTACGGAA GGGATCCTGC CCGCTCTGGA AAGCGCTCAC
GCCCTCGCCT ATGCCCTGAA AATCTCCCCC ACCTTTTCCC CGGCCCAGCA CATCATCGTC
AATCTGTCCG GTCGGGGGGA CAAAGACATG GAAACCTTTG CTCACTTTAT TTACGACTAA
|
|---|
| Protein sequence | MIAKDQDFTP LASRFGTYGG AYVPETLIPV LDELAEAYNQ VRNDPGFQND LKELLADYVG
RPSLLYYARR LSESLGGAQI YLKREDLNHT GAHKINNTLG QILLAKRMGK TRVIAETGAG
QHGVATATAC ALMGLNCVVY MGEKDIERQH LNVLRMQMLG SEVRSVATGS KTLKDAINEA
LRDWVAHPRD TFYCFGTAAG PHPYPTIVRD LQRIIGEETR SQFLSLRGRL PDLLVACVGG
GSNAIGFFHP FLADEHVQLI GVEAGGKGLG SGDHAATLSL GRPGILHGAY SYLLQDEEGQ
IPDTHSISAG LDYPGVGPEH SHLKDIERAR YVSVTDNETL EASKLLARTE GILPALESAH
ALAYALKISP TFSPAQHIIV NLSGRGDKDM ETFAHFIYD
|
|---|
| |