Gene Dhaf_4365 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_4365 
Symbol 
ID7261390 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand+ 
Start bp4630940 
End bp4631629 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content48% 
IMG OID643564282 
ProductPeptidoglycan-binding LysM 
Protein accessionYP_002460806 
Protein GI219670371 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3546] Mn-containing catalase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones121 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACTATA CCCGTTATGT TGTACAACCT GGGGATAGTA TTTATAAAAT CGCCAATGCC 
TATAAAATCG AAATGTCCGA CATCATCAAT CTCAACCATC TGAAACATCC TGATCGCATC 
TATCCCGGAC AAATCCTTCT CCTTCCTACC TATGAGTTCA AGGATACACT ACCCGGAGAA 
ATACCTGAGC CCAACTTTAC TTATGCCATG TGGCTGTTCG ACGTCTATGC CGGCAAGGAT 
TCTGAGCTCT CGGCAGTTAC GACTTACCTG TATCAAGCTG TAGTTTTGGA TCGGCCGGAG 
TTCGATGAGC TCCTCCGCCC CATTGCCTAT GACGAACTCC GCCACCTGGA GCAGCTGGCC 
TGGTGCATTC GCTTTTTAGG GGTGGACCCT CGTTACGGCT CCTTCAGCAA GGGGCGTTGG 
TTCGACTGGC GTTCCCGCTA TCTTAATTAC TCCACAGAGC TCTGTGTCAT TCTTGACCAC 
AATATGAAGG ACGAAGCTGC CGCTGTAAAA CATTACACAG ATTTAGCGCA AAAAATCCCC 
ATACCTGAAA TCCAAACCAT CCTTCTTCAA TTAGCCGCTG ACGAAGAACG TCATTACCAG 
TGTTTAGCCC AAGCCAAAAC ACGTTTCTGC GGGTGTGGTT CATCCCAAAC CCAACACATC 
AAAGAAAGTT CAAACGGAGA AGAGTTATAA
 
Protein sequence
MDYTRYVVQP GDSIYKIANA YKIEMSDIIN LNHLKHPDRI YPGQILLLPT YEFKDTLPGE 
IPEPNFTYAM WLFDVYAGKD SELSAVTTYL YQAVVLDRPE FDELLRPIAY DELRHLEQLA 
WCIRFLGVDP RYGSFSKGRW FDWRSRYLNY STELCVILDH NMKDEAAAVK HYTDLAQKIP 
IPEIQTILLQ LAADEERHYQ CLAQAKTRFC GCGSSQTQHI KESSNGEEL