| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_4348 |
|---|
| Symbol | |
|---|
| ID | 7261373 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | - |
|---|
| Start bp | 4610375 |
|---|
| End bp | 4612468 |
|---|
| Gene Length | 2094 bp |
|---|
| Protein Length | 697 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 643564265 |
|---|
| Product | penicillin-binding protein 2 |
|---|
| Protein accession | YP_002460789 |
|---|
| Protein GI | 219670354 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0768] Cell division protein FtsI/penicillin-binding protein 2 |
|---|
| TIGRFAM ID | [TIGR03423] penicillin-binding protein 2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGAAG ATAAAGAACG CAAACCCTAT ACACGCCGTC TCTGGGGCCT TAGCGCCGTC
GTGTTTCTCG TATTCCTGAT TCTTGGCTTC AACCTTTGGC GATTACAAAT CGCCAAAGCT
TCCTATTACG AGACAAAGGC CCAGGGTAAT ATCATGAAAC TGGTCTCCAT CCCTTCCAAC
CGTGGAGACA TTGTCGATCG CAATGGTGAA TTGCTGGTTA CCAGTGTGCC TCAGTTCGCT
CTGACTATTG ATTGGATGGA TCTGCAAACG GCTCCCGTCG ATAGTGTGCA GGAAGTCGTT
GCCCGCCTGG CGGGCTACAT TAAACCCTAT TGGCCGATTA AAGAGCAAAG TGTGGAGAAT
ATCACAGAGG ATATTCTGGT CATGATGCAA AATCAGCAGT GGGAGCGTTA TCGATCGGTT
ACGGTTATGG GTGATGTGCC GGATCCTCTC AAGGCTATTA TTGCGGAGCA TAAGGATGAA
CTTCCGGGTA TTAACATCGA AGCATTGCCT GTACGTGATT ATCGCAAGGG TACCTTAGCC
GGTCATCTTT TGGGATATGT CCGTGAAGTA GGCAGTGAGG AGGAAATTGC TTCGTTTAAT
AAAAATCCTC AAGCCCAGGA GGATGGGTTT AAATACACCC AAGGGGATCA GGTAGGAAAA
ATGGGCGTGG AAAAAGGCTA CGATTACTGG CTGCGCGGCA GAGAAGGGGT TCAGCAGGTC
ATCGTGGATA ATAGTGCCCG CCCCATTGCC AAAGAAGTCA TTCAGCCCTC CGAGCCCGGG
AAAACTCTGC AACTGACCCT TGATGCCAAG CTGCAGGCTG TGGTGGAGAA GACCTTGGAT
GATGTGTTCA GGGAGTATGT ACATCCTCAG CATCCCGACT CCAATCAGGG TGCCGCAGTA
GTCATAGAGG TTAAGACGGG AAAGATCCTG GCGATGACTT CCCATCCCTA TATGGATCCT
AATGATCTCA CTGGGATTAT CTCTGAGGAA CTTGCCGAGA AGTATTTCCA AGCGAAAGAT
GCAGCCTCCT ATAATCGGGC ATTATCCGGA ACCTATGCCC CGGGCTCAAC CTTTAAAATG
ATTACAGCTA TGGCCGGTTT GCATGCCGGC GTGGTGACTC CTTATGAGCA GTTTAACAGC
TCCAATGTGG CGGCTACTTT GGGAACGATC CATGGTATTC AGGAGTGGTC TTGGGGAGGG
TTCGGATTAG TGGATCTGAA TCGGGCCATG GCTAAGTCTT CCAATACCTA TTTCCAAGCG
GTGGGGCAAA GAGTCTTTAA TAAAAACGGA GAGCTGATAA AGCAGATTGC CAATGAATTT
GGTCTCGGTG TCTATACGGG TGTGGATATT CCCGGTGAGT CCAAAGGAAG TGCTCCTTCA
CCGGAATGGA AAAAGGCAAC TTTCGGGCCC CAATATGAAA AAGCCAGGGA TAATGCCCTT
GCCAAAATCG AAGAGGAGTA TAAGGCCAAG CTTGGGTCGG CTAAGGATGA GGCCGAGCGG
AAGAAATTAG AAAGCCAGAA GAAGAGCAAG ATCAATCAAG TGGAAGCGGA TTACGCCTAT
AATGTTCGTT GGTTTGTCGA TTGGCAGTAT TCCGAGACCT TTAATACCTC GATCGGACAA
GGGGATAATG TCTATACGCC ATTGCAGCTT GCTAATTATG TGGCGACCAT TGTCAACGGC
GGTAAGAGAA TGCAGCCCTA TGTGGTGGAC AAGATCCTGG ATCCTGTGAC AGGTGAAACA
GTGTATCAGA ACGAACCTAT AGTCAGAAAC ACCGTCTCGG TTTCCCCGGA AATATTGCAG
ACAGTTAAAG AGGCTATGAG CAAAGTTACC ATCGGTGAAG GAACGGCAAG CGGAATTTTT
GCTGATGTTC CGGAGTTCAG CGGCGGGGCC AAGACTGGGA CGGCTCAGAT CGGTTCCAAA
GGTACAGCAG CCGGGGAGCT CTTTAATGGG GTCTTTGTGG CCTTTGCACC TTATGATGAT
CCGCAAATAG CTTTTGCCGG AGTTGTCGAA TACGGAGGCC ATGGCGGTGA AACTGCCGGT
GCTGTAGCTA AAGCTGCTTT TATGGAGTAT TTTGGCTGGG AATCTAACAA ATGA
|
|---|
| Protein sequence | MEEDKERKPY TRRLWGLSAV VFLVFLILGF NLWRLQIAKA SYYETKAQGN IMKLVSIPSN
RGDIVDRNGE LLVTSVPQFA LTIDWMDLQT APVDSVQEVV ARLAGYIKPY WPIKEQSVEN
ITEDILVMMQ NQQWERYRSV TVMGDVPDPL KAIIAEHKDE LPGINIEALP VRDYRKGTLA
GHLLGYVREV GSEEEIASFN KNPQAQEDGF KYTQGDQVGK MGVEKGYDYW LRGREGVQQV
IVDNSARPIA KEVIQPSEPG KTLQLTLDAK LQAVVEKTLD DVFREYVHPQ HPDSNQGAAV
VIEVKTGKIL AMTSHPYMDP NDLTGIISEE LAEKYFQAKD AASYNRALSG TYAPGSTFKM
ITAMAGLHAG VVTPYEQFNS SNVAATLGTI HGIQEWSWGG FGLVDLNRAM AKSSNTYFQA
VGQRVFNKNG ELIKQIANEF GLGVYTGVDI PGESKGSAPS PEWKKATFGP QYEKARDNAL
AKIEEEYKAK LGSAKDEAER KKLESQKKSK INQVEADYAY NVRWFVDWQY SETFNTSIGQ
GDNVYTPLQL ANYVATIVNG GKRMQPYVVD KILDPVTGET VYQNEPIVRN TVSVSPEILQ
TVKEAMSKVT IGEGTASGIF ADVPEFSGGA KTGTAQIGSK GTAAGELFNG VFVAFAPYDD
PQIAFAGVVE YGGHGGETAG AVAKAAFMEY FGWESNK
|
|---|
| |