| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_4341 |
|---|
| Symbol | |
|---|
| ID | 7261366 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | - |
|---|
| Start bp | 4602606 |
|---|
| End bp | 4604462 |
|---|
| Gene Length | 1857 bp |
|---|
| Protein Length | 618 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 643564258 |
|---|
| Product | Radical SAM domain protein |
|---|
| Protein accession | YP_002460782 |
|---|
| Protein GI | 219670347 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1032] Fe-S oxidoreductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.898209 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGATT ATAATGCGGC AGATATTCGT AAGCAGGTGG AACGTTTCCT GCCCAAGGTA
TTAAAGCCGA GCAGATATCT TGGCACAGAG TGGAATGCAA TTCGTAAAGA TTGGGAGCAT
AGCAAAGTTC GGATGGCTTT TGCTTTCCCG GATGTCTATG AAGTGGGAAT GTCCCATCTT
GGCTTGAGGA TTCTCTATCA TTTGGTAAAC TCCTATGAGG ATTTTCTATG TGAACGGGTC
TTTGCTCCTT GGGTGGATAT GGAAGATAGG ATGAGGGAGA ATACTATTCC CCTCTATGCT
TTGGAATCCT ATCGCCCCTT ACAGGAATTT GATGTGGTAG GATTTACCCT GCAATACGAG
ATGAGCTTTT CCAATATCCT TAATATGCTG GATTTGGCCG GGATCCCGCT GCGGACCAAA
GACCGGGGAC CGGAGCATCC TTGGGTCATC GCCGGTGGAC CGTGTGCCTA TAACCCGGAA
CCGCTCGCCC CGTTTATCGA TTTCCTGATG ATCGGAGAGG CGGAAGAAAC CCTGCCCCAG
CTCCTTCGTT TAATTCAAGA GCAGAAGGAA AATCCGGTTT CCCGGGAGGA GTTTCTCCTA
AAAGTAGCTC AGGTGGAGGG GGCTTATGTC CCGGAATTTT ACCAGGTCCG TTACCTGGAA
GACGGACGGA TTCAGTCCAT AGAAGCAGAT CCCCGGGTAC CCAAGATTGT CCAAAAGGCT
ATCGTTCGCA ATTTGGATCA AAGTTACTTC CCCACCAGCC CCATTGTCCC TTATATGGAG
ATCGTTCACG ATCGCATGAT GCTTGAGGTC ATGCGTGGAT GCTCAAGAGG CTGCCGCTTT
TGTCAAGCGG GGATGCTCTA TCGCCCGGTG CGTGAACGTT CGCCGGAAAC ATTGCTGAGG
CATGCGGAAG AGCTGGTTAA ATCCACAGGC TATGAGGAAA TCTCCTTAAC CTCCCTCTCC
ACCGGAGATT ACAGTTGTAT TCAACCGGTT ATTCGGGGAA TCCTGGATAA GTACAGCGAG
GATAAAGTCA GTGTGTCCTT ACCTTCTCTG CGCTTGGATT CTTTCGATGT GAAGCTGGCT
GAAGAAGTTC AAAAGGTAAG AAAATCCGGG CTTACCTTCG CTCCGGAAGC GGGAACCCAA
CGCTTGAGGG ATGTGATCAA TAAAGGGGTC ACCGAGGAGA ATCTTCTTGA TGCGGCGGAA
TCTGCCTTCA AAGCGGGATG GTCCAGCATC AAGCTCTACT TTATGATTGG TTTGCCTACG
GAGGCTCAGG AGGATTTGGA CGGGATTGTA TCTATGGCCA AAAAGGTAGT CGAGCTGGGA
ACGCGCTTAG GCCGCCGGAA TGTGAATGTC ACGGTGTCCA CCAGTTCCTT CGTCCCCAAA
AGCCATACTC CCTTTCAATG GGAGCCCCAG GAAGGAACGG CTTCCCTAAA ACAAAAACAA
CAGTATTTGC GTGAAAAGTT GCGGGATCGC CGCATTAAGT ATAATTATCA TGATGTAGAA
ACAAGCTATT TGGAGGCAGT TTTTGCTAAA GGAGACCGGC GCCTGGCCGA CGTATTGGAA
CTGGCCGTCC GGAAAGGCTG TAAGTTCGAT GGCTGGAATG AGCATTTTAA GTATGAAACA
TGGCTGGAAT GCATAGAAGA ACTAGGGCTT GATCCTCATT TTTACGCTCA TCGGGCGATG
GACTATGACG ATATACTTCC TTGGGATCAT ATTGAGAGCG GCGTGAATAA GCGTTTCCTC
ATGAATGAAC ATCACAAGGC ATTGAAAGAG TCAAGGACAC TGGACTGCCG GTATGTGGAT
TGCACAGGGT GCGGTATCTG TCCTGAACGA GGGTTACAGA TTGATTTGAA AGGGTGA
|
|---|
| Protein sequence | MTDYNAADIR KQVERFLPKV LKPSRYLGTE WNAIRKDWEH SKVRMAFAFP DVYEVGMSHL
GLRILYHLVN SYEDFLCERV FAPWVDMEDR MRENTIPLYA LESYRPLQEF DVVGFTLQYE
MSFSNILNML DLAGIPLRTK DRGPEHPWVI AGGPCAYNPE PLAPFIDFLM IGEAEETLPQ
LLRLIQEQKE NPVSREEFLL KVAQVEGAYV PEFYQVRYLE DGRIQSIEAD PRVPKIVQKA
IVRNLDQSYF PTSPIVPYME IVHDRMMLEV MRGCSRGCRF CQAGMLYRPV RERSPETLLR
HAEELVKSTG YEEISLTSLS TGDYSCIQPV IRGILDKYSE DKVSVSLPSL RLDSFDVKLA
EEVQKVRKSG LTFAPEAGTQ RLRDVINKGV TEENLLDAAE SAFKAGWSSI KLYFMIGLPT
EAQEDLDGIV SMAKKVVELG TRLGRRNVNV TVSTSSFVPK SHTPFQWEPQ EGTASLKQKQ
QYLREKLRDR RIKYNYHDVE TSYLEAVFAK GDRRLADVLE LAVRKGCKFD GWNEHFKYET
WLECIEELGL DPHFYAHRAM DYDDILPWDH IESGVNKRFL MNEHHKALKE SRTLDCRYVD
CTGCGICPER GLQIDLKG
|
|---|
| |