| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_4320 |
|---|
| Symbol | |
|---|
| ID | 7261345 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | + |
|---|
| Start bp | 4582467 |
|---|
| End bp | 4583750 |
|---|
| Gene Length | 1284 bp |
|---|
| Protein Length | 427 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 643564237 |
|---|
| Product | transcriptional regulator, AraC family |
|---|
| Protein accession | YP_002460761 |
|---|
| Protein GI | 219670326 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG4936] Predicted sensor domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 51 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTGATGA ATCGGTCAAG TCTGGATGGC TTCTTTGATC CTTCTTACCT GGAAAATATA
TTAGGTAATT TTACACAGGC CACAGGCCTT AGAATCGAGG CCGTCAACTA TCGCGGCGAG
ACCTTTTCCA TTCCGGGAAG TTTGGACAGG TCCCCTTTCT GTCAATGCAT CCGCAACAAT
CCTCAGGGCA ATAAACGCTG TATTGATTCT TATAAACGGG CCACCAGCGA AGCCGTCAAA
TGGGATGAAC CCTATTTCTT CCGCTGCCAT GCAGGCCTTG TGATCTGGGC TGTTCCCATC
CTCAGCAAAG ACATTACTTT GGGAAGCATT ATCTGTGGCC AGGTTCTCCT CTGGAAGCCG
GATCGCTTTT TTATTCAGGA ATTACAGGAT ATCAGCAAGG GGCTTAAAAT CGACCCGGAA
GAATTAAATC AAGCTGTTCC CAATCTCTCC ATCATATCCG CCGACCAGGC CCAGGCTGCC
GCTAATCTTC TCTTTGTGGT GGTCAGCCAT ATCCTTAAAA ACAATCTGCG GGCCTTAGAA
GAAGAGAAAG CCTACAAGGT CTTACAGCAA CAGCTCCATG ATCAAATACT CAAACGCAAA
AAGGGTCCCC GGAGAACGGA TATCTCTTAT GAATCCATCT TAAAAGATGA AAGGAGATTT
CTTCAATACA TTCGGCTTGG GGATAAATCA AGAGCCTTTG CTACCTTGGA AAACTTAATC
ATCAAAATCT ATACGAAATC CACCGGTGAG CCCCAATTAG CCAAAGACAG AATCGTTGAG
TTGGCTGCTT TAACATCCCG GGCCGCCGTG GAGGGGGGTT CCGACGCGGA ACAAGCCGTA
ACCATTCTCA GTTCATTCTA CAAAAAACTG GAGAATATGG AGCGGGTCGA GGAGATCATC
TACTTCATTA AGCAGATTGT TGATGAATTT CTGGAAAACA TCTTTATCTT AGCTGATAAA
AAACACTTAA GCCTGGTCAA GGATGCCCGC TCCTTCATTC TTCATAATCA TGCCCAGCCT
TTAACGATTG CGGATGCAGC CCAACACCTC TTTATCAGCC CTTCTCACCT TTCTAGACTT
TTTCGTCAGC AATTGGATTG TACATTTAAT GATTACTTAA CCCGTGTCCG GGTGGAGAAA
GCCGTGGAAC TCTTGAAGAA ACCCGAATTC AGTGTCAAAG ATGTGGCATT GGCCGTCGGT
TTTCAAAACC AGAGCCATTT TGCCAAAGTC TTCCGCAAAT ATATCGGAGT TACGCCTTTA
GTCTATAGAA ACAGCCTATT TTAA
|
|---|
| Protein sequence | MVMNRSSLDG FFDPSYLENI LGNFTQATGL RIEAVNYRGE TFSIPGSLDR SPFCQCIRNN
PQGNKRCIDS YKRATSEAVK WDEPYFFRCH AGLVIWAVPI LSKDITLGSI ICGQVLLWKP
DRFFIQELQD ISKGLKIDPE ELNQAVPNLS IISADQAQAA ANLLFVVVSH ILKNNLRALE
EEKAYKVLQQ QLHDQILKRK KGPRRTDISY ESILKDERRF LQYIRLGDKS RAFATLENLI
IKIYTKSTGE PQLAKDRIVE LAALTSRAAV EGGSDAEQAV TILSSFYKKL ENMERVEEII
YFIKQIVDEF LENIFILADK KHLSLVKDAR SFILHNHAQP LTIADAAQHL FISPSHLSRL
FRQQLDCTFN DYLTRVRVEK AVELLKKPEF SVKDVALAVG FQNQSHFAKV FRKYIGVTPL
VYRNSLF
|
|---|
| |