Gene Dhaf_4318 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_4318 
Symbol 
ID7261343 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp4580075 
End bp4580725 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content52% 
IMG OID643564235 
Productcompetence protein ComEA helix-hairpin-helix repeat protein 
Protein accessionYP_002460759 
Protein GI219670324 
COG category[L] Replication, recombination and repair 
COG ID[COG1555] DNA uptake protein and related DNA-binding proteins 
TIGRFAM ID[TIGR00426] competence protein ComEA helix-hairpin-helix repeat region
[TIGR01259] comEA protein 


Plasmid Coverage information

Num covering plasmid clones76 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAACT CTGAGGATTA TGGGGTGATT TTGTTGGAGC GCAAGATCCG TTACTTTTGG 
TGGGGAGTCT TAGGTCTTTT GATCGTGGCA GCGGTCTGGA AATTTATCCT GCCTCACAAT
TCGGCCATAA TGGTGGAGAA GGCGGTTGAA AATCGGGAAA TCATCGTTTA CGTGTCCGGG
GCGGTGGAAA AGCCCGGGTT GGTTCATTTG CCGGTGAATG CCCGTTTACA TGACGCTTTG
CAGCAGGTTG GCCCTTTGCC TGAAGCGAAC ATCGATCAGA TTAACCCTGC GGAGAAGCTA
AAGGACGGCC AGAAGATCAT TGTGCCATAT AAGCCGGTGC CGCAACCGCA ACCTCAGCCT
GCTCTGGCAG CCGCCGGGTC CCAGGGAGAG TCCCAGGGGC AGACAGCCAC AGTCACCCCT
AACCTGGGTG CAGCTGCCCC ATCACGCTCC TCTAATTTAA TCAATATCAA TACAGCCGAT
GCCGCCGAAT TGGATAAGCT GCCGGGGATT GGACCTGCGC TTGCTGAACG GATTATTCAA
TATCGGATGG AGCATGGTCT TTTTCTTCAG CCTGAGGATT TGAAAAAGGT TTCCGGTATT
GGGAATAAGA CCTATGCCAA GATGGCTGAT ATGGTCACGG TGGGGCCATG A
 
Protein sequence
MSNSEDYGVI LLERKIRYFW WGVLGLLIVA AVWKFILPHN SAIMVEKAVE NREIIVYVSG 
AVEKPGLVHL PVNARLHDAL QQVGPLPEAN IDQINPAEKL KDGQKIIVPY KPVPQPQPQP
ALAAAGSQGE SQGQTATVTP NLGAAAPSRS SNLININTAD AAELDKLPGI GPALAERIIQ
YRMEHGLFLQ PEDLKKVSGI GNKTYAKMAD MVTVGP