Gene Dhaf_4309 details

Gene Information

• Locus tag: Dhaf_4309
• ID: 7261334
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfitobacterium hafniense DCB-2
• Kingdom: Bacteria
• Replicon accession: NC_011830
• Strand: -
• Start bp: 4568278
• End bp: 4570074
• Gene Length: 1797 bp
• Protein Length: 598 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 643564226
• Product: flavocytochrome c
• Protein accession: YP_002460750
• Protein GI: 219670315
• COG category: [C] Energy production and conversion; [S] Function unknown
• COG ID: [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit; [COG3976] Uncharacterized protein conserved in bacteria
• TIGRFAM ID: [TIGR01813] flavocytochrome c

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.0000000000651715
• Plasmid hitchhiking: No
• Plasmid clonability: unclonable

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAGA TTAGTGCGTT GATTCTTGCT CTCTTAATGG TCGTTGGTCC TATCACTGGC 
TGCGGTACAG AATCGGCAGT CAATGAAACG CCTGGAACAA GTACACCTGC CGTACAAGAC 
AAGAGTACCG ATATCGTGGT CATTGGTGCC GGTGGAGCAG GAATGACAGC AGCCATTCAA 
GCGGTCCAGG ATGGTGCGAA GAATGTGGTT CTTGTCGAAA AAATGCCTAT TACAGGCGGA 
AACAGTGTCC GTTCTACAGG CGGTTTAAAT GCAGCTCCTA CCAAATATCA AGAAAGAGAT 
GGCATCAAAG ACTCCATCGA GCTTTTTGTG GAAGATACCA TGAAGGGCGG ACATAATCTT 
AATGATGAAT CACTGGTCAG AACTTTGGCT GAAAACTCCG CTGCCGCGGT AGACTGGGTC 
AACGACATTG GCGGCGATTT AAGCGTGGTC GGTATGTTTG GCGGGGCCAG TGTAAAACGG 
ATTCACCGTC CTTCGGATAC AAGCGCTGTC GGTCCTATGC TCGTTACTAC CTTAAACAAT 
AAAGTTGAGG AATTAGGTAT TCCTGTTCTT CTTAACACGA AAGCTGAAGA AATTCTTGTG 
GATGCTAATG GAGCAGTAAC CGGAGTCAAA GTAACCGGTG AAGAAGGAAC CTACACCATC 
AAGACCAAAG CTGTGGTCCT GGCTACCGGC GGCTTTGGTG CCAATGCCGA AATGGTCACG 
AAGTACAAGC CAGCCTTGGC AGGGTTCGCT ACAACCAACC ATAAAGGGGC CACTGGGGAC 
GGAATCGTTA TGGCCGAAAA AATCGGTGCT GGCTTCGTCG ATATGGAGCA AATTCAAACT 
CATCCCACCG TAAATCCTAC GGATCAAACG ATGTACACTG AAGGGGTTCG CGGTAACGGT 
GCAATCCTCG TGAATAAGGA AGGAAAACGT TTTATCAATG AATTAGAAAC TCGTGATGTG 
GTTTCCGAAG CCATCTTGAA ACAAACAGAG GGTCAAGCTT ATCTATTATT TGATCAAGAG 
GTTCGTGAAA GCTTAAAAGC TATCGAATCT TATATCAAGG GTGGAATCAT TGTTGAAGCC 
GACACGATTG AGGGTCTGGC TGAACAAATC GGCGTTGACC CGGCTAATTT GAAAGAAACT 
ATGGAGAAAT ATGCCGGATA TCAAGCTTCC GGCAGCGACC CGGATTTTGG ACGGGCCAGT 
ATGGAATTCC CTCTTACCCA ATCTAAATAC TATGCCGGCT TATGTGCTCC TGCCGTTCAT 
CACACTATGG GTGGGGTGAA GATCAACACG GAAGCTCAAG TGCTCAATAC AGACGGCAAT 
CCTATTCCGG GACTCTTTGC CGGTGGTGAA ATCACCGGTG GAGTTCATGG TGGAAACCGC 
CTTGGCGGCA ATGCTGTTGC CGATATCGTC ATCTTTGGCC GTATCGCCGG ATCGGCTGCT 
CATGCTTATG TCATGGAAAA CGGCGGAACC ACGGAACCCA CCATTCAGGC AGCAGCTAAA 
CCGGCTGAAG CAAAACCGGA AGTCGAAGCC AACTACAAAG ATGGCACCTA TACCGGCGTC 
GGTCAAGGTA AAGGCGGCGA GATTAAGGTA GAAGTCGTGG TTAAAGACGG AGAAGTGATT 
AAAGTAACCC TGAAAGATCA TGCCGAAACC CCCGGTATAT TCGAGAACGC TGAAGAGGGC 
GTGGTGGGAG AAATCATCCG CAAGCAAATC ACGGAAGTGG ATGCTGTCGG TGGCGCCACC 
ATGACCAGTG AGGGAATCAA AGCGGCAGTA GCTCAAGCTT TGGAAGCAGC GAAATAA 

 

Protein sequence

MKKISALILA LLMVVGPITG CGTESAVNET PGTSTPAVQD KSTDIVVIGA GGAGMTAAIQ 
AVQDGAKNVV LVEKMPITGG NSVRSTGGLN AAPTKYQERD GIKDSIELFV EDTMKGGHNL 
NDESLVRTLA ENSAAAVDWV NDIGGDLSVV GMFGGASVKR IHRPSDTSAV GPMLVTTLNN 
KVEELGIPVL LNTKAEEILV DANGAVTGVK VTGEEGTYTI KTKAVVLATG GFGANAEMVT 
KYKPALAGFA TTNHKGATGD GIVMAEKIGA GFVDMEQIQT HPTVNPTDQT MYTEGVRGNG 
AILVNKEGKR FINELETRDV VSEAILKQTE GQAYLLFDQE VRESLKAIES YIKGGIIVEA 
DTIEGLAEQI GVDPANLKET MEKYAGYQAS GSDPDFGRAS MEFPLTQSKY YAGLCAPAVH 
HTMGGVKINT EAQVLNTDGN PIPGLFAGGE ITGGVHGGNR LGGNAVADIV IFGRIAGSAA 
HAYVMENGGT TEPTIQAAAK PAEAKPEVEA NYKDGTYTGV GQGKGGEIKV EVVVKDGEVI 
KVTLKDHAET PGIFENAEEG VVGEIIRKQI TEVDAVGGAT MTSEGIKAAV AQALEAAK