Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_4302 |
Symbol | |
ID | 7261327 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | - |
Start bp | 4553324 |
End bp | 4553992 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 643564219 |
Product | sortase family protein |
Protein accession | YP_002460743 |
Protein GI | 219670308 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3764] Sortase (surface protein transpeptidase) |
TIGRFAM ID | [TIGR01076] LPXTG-site transpeptidase (sortase) family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0000168018 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGAAGA AAATTAGCTC CATCATCTTC ATCGTGGCAG GACTCACTCT GCTGGCCTAT CCCAAGGCAG CGGAAATGCA CAGCACCTAT CTGCAGAAAA AGCTGGTCAG CGAATGGCAA GCAGCCCTTG CCGCTGTGGA TCAAGGAGAA CGAGCCGCTG ACCCGGCCCC TGATCAGGAT GCTGAAGAAA GCAGCCCGGC GAAAGAGTCG CCGGGTGATT TGCCGGAAGA GTTCATCACT CCGGAAGAAA AAGACAGACA AGATTATATA CACGACACGA TGGAAGGAAT GCTCAAGATC GAGAAGATCG GCCTTGAGCT GCCCATCCTC AAAGGTGTAA CCGAAGCAAA CCTGGATCTA TCGGTAGCTC ATATGGAGAA CACCGGGAAC ATGGGTGAGC CGGGCAATTA CGCCATAGCC GGTCATCGAA GCCATACTTA TGGCCGGCAA TTCAACAGGC TGGAGGAAGT CAATCCGGGA GACCGGCTGG AAGTAACCGA TGGGAAGACT ACCTATACCT ACACCGTAAC CCAAAAATTA TATGTTGACC CCACGGAAAC CTACGTTCTT AACAGCAATA AGGATATCAG CGAAATAACC CTCATTACCT GTCACCCCAT GATCAACCCG ACTCACAGGC TGATCATTAA AGGAGTATTA GGGGGGTGA
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Protein sequence | MSKKISSIIF IVAGLTLLAY PKAAEMHSTY LQKKLVSEWQ AALAAVDQGE RAADPAPDQD AEESSPAKES PGDLPEEFIT PEEKDRQDYI HDTMEGMLKI EKIGLELPIL KGVTEANLDL SVAHMENTGN MGEPGNYAIA GHRSHTYGRQ FNRLEEVNPG DRLEVTDGKT TYTYTVTQKL YVDPTETYVL NSNKDISEIT LITCHPMINP THRLIIKGVL GG
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