Gene Dhaf_4300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_4300 
Symbol 
ID7261325 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand- 
Start bp4551341 
End bp4551982 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content47% 
IMG OID643564217 
ProductGrpE protein 
Protein accessionYP_002460741 
Protein GI219670306 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0576] Molecular chaperone GrpE (heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0000230249 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGAACT GGGGCGGGAA AACCCCCCCA TCGGGTCAGA CCGAATGGGA AACTAAAAAT 
ACTCAAGAGT CAAAGGAAAA TTTGACCGAT ACTGTTGAAG AAATCCTTAG CGAAGCTGTC 
CAAGAGGAAG AAGTGGGGAA TGAATCTTCT CCGGAGCAGG ATGTTTCTTT AGAAGAAAAA 
ATACTCACTC TTCAGGCAGA ACTTGACCAG ACCAAGAACC AGGCAGAGGA ATACTATACT 
CATCTCCAGC GCTTGCAGGC TGAGTTTGAC AACTATCGCA AACGGACCCA AAAGGAGAAG 
GAGGATTTCG CCAAATATGC CTCAGAGCGT GTTGTAGAAG GGTTGCTGCC TGTATTGGAC 
AATTTTGAAC GGGCAGTGGA AGCTTCCAAG ACCACTCAAG ATATGAAGTC CTTTTCCCAA 
GGAGTAGAGA TGATTTTCAA ACAACTGCAA GGCATTCTTG CCAAGGAAGG ATTGGCGGCG 
ATTGAAGCCG TGGGGCAGCC TTTCGATCCC AACCTACATG AAGCCGTCCT TCAGGTGGAT 
TCAGAAGACT ATCCGGAGAG CACCGTGGTG GAGGAGCTTC AAAAAGGTTA TTATCTTAAA 
GAAAAAGTAA TACGTCCTAG CATGGTCAAA GTGTCCCGCT AG
 
Protein sequence
MVNWGGKTPP SGQTEWETKN TQESKENLTD TVEEILSEAV QEEEVGNESS PEQDVSLEEK 
ILTLQAELDQ TKNQAEEYYT HLQRLQAEFD NYRKRTQKEK EDFAKYASER VVEGLLPVLD 
NFERAVEASK TTQDMKSFSQ GVEMIFKQLQ GILAKEGLAA IEAVGQPFDP NLHEAVLQVD 
SEDYPESTVV EELQKGYYLK EKVIRPSMVK VSR