Gene Dhaf_4296 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_4296 
Symbol 
ID7261321 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp4546460 
End bp4547197 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content56% 
IMG OID643564213 
Productprotein of unknown function DUF558 
Protein accessionYP_002460737 
Protein GI219670302 
COG category[S] Function unknown 
COG ID[COG1385] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR00046] RNA methyltransferase, RsmE family 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0203187 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCATCGCT TTAAAATCTC CGAACTGGGG AACCATGTCT TCTGGCTTAA GGGACCGGAA 
AGAGAACATC TTGTCCGGGT CCTGCGTCTT GCGGTGGGTG ACCGGATCAT CGGTTTTGAC
AACACGGGGG CGGAGTACAA GGCAGTCGTT AATAAAATAG AAGAGCAAAG CGTAACCTGC
GGCATCCTGG AGCAGGATTA CCCGGAAGTA GAAGCGGTTA CCCGGATTTA TCTGGCAGCC
GGCCTCTCGA AAGGGGAAAA GATGGAGTGG GTCATCCAAA AGGGAACGGA ATTGGGAATG
GCGGGTTTAA TCCCCCTGCG CACCAAACGG GCTGTGATGA AGCTGGAAGG GAGCAAGGCT
GCAGACCGGG TGGAACGCTG GCAAAAGATC TCCGGCGAGG CGGCTAAGCA ATCCCACCGG
GTCCGGGAAC CGCAGATCTT TTCCGTAACC GATTGGCAGG GGCTTAAAGC TCTGCTTCCG
CCAACTACCC AGTGGCTAAT TCCTTATGAA AACGAGAAAA CCAGGACCCT CTCCTCGGTG
CTGAAGGACT TCAGTTCACA AGAGCCGATA GCACTGATCA TCGGCCCGGA AGGGGGCTTC
GAGGAAGGGG AAGTTCTTTG GGCTCAGGAG CACCTCAACG CCCAAAGCAT CTCCTTAGGC
CCGCGCATTC TCCGGGCGGA GACGGCGGCC CTTGCCGCTC TGACCTTGGT GTTAGGGCAT
TATGGTGATT TGGGCTGA
 
Protein sequence
MHRFKISELG NHVFWLKGPE REHLVRVLRL AVGDRIIGFD NTGAEYKAVV NKIEEQSVTC 
GILEQDYPEV EAVTRIYLAA GLSKGEKMEW VIQKGTELGM AGLIPLRTKR AVMKLEGSKA
ADRVERWQKI SGEAAKQSHR VREPQIFSVT DWQGLKALLP PTTQWLIPYE NEKTRTLSSV
LKDFSSQEPI ALIIGPEGGF EEGEVLWAQE HLNAQSISLG PRILRAETAA LAALTLVLGH
YGDLG