| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_4281 |
|---|
| Symbol | |
|---|
| ID | 7261306 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | - |
|---|
| Start bp | 4532466 |
|---|
| End bp | 4533677 |
|---|
| Gene Length | 1212 bp |
|---|
| Protein Length | 403 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 643564198 |
|---|
| Product | sporulation protein YqfD |
|---|
| Protein accession | YP_002460722 |
|---|
| Protein GI | 219670287 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02876] sporulation protein YqfD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 75 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTGCTA GGTTCCGAGA GTTTCTGCAA GGGCGTGTTC TTTTTGTGGC CCGGGGAAAT
CAGCTGCCTC GATTTATTAA TGAGGGAATA CGCCAGGGCA TTGTATTCTA TAAAACCCAG
CGCTCAGAAA AAGGCGTAAG AGCCCAAGTG AAGATTCAGG ACTTCCGCCG CTTAAAGCGG
CCTGCCCGCC TGACTCATAC CCGAGTGCGC ATCGTGGCAA AATACGGATG GCCTTTTGTA
GCCGCACGCT GGTGGCGGCG GAAGTTCTTA TTGGCTGGGA TTATGATTAT CGGTGTGGCA
CTGGCTGTCT TGTCCCAGAT GATTCTTTCT ATTTCCGTGT CGGGGAATAC GACGATTTCC
AGTCAGGAGA TTTTTGACAG CGCCGAAAAA CATGGGCTCA AGACGTGGAC GCGGCAGGAT
TCCGTGGATT TAAATGAAGT TTCCAAACTA TTGGTTGAGG AATTCCCGGA TGCCGCCTGG
GTCGGTATCA GCAAACATGG CACTCGTGTG GAGATTAAAG TAGTGCAAAA AGTCCGTCCT
CAGGTTCCGG GTGAAGCTGG GAATTTAGTA GCCAGCAAGG CTGGATTGGT TCAGCAGGTT
ATGGTCATCC AAGGGACTCC GCTGGTTCAT GAAGGGGAAA TTGTCAAGCC GGGGCAGGTC
CTGATTCAAG CACCAAGAGC TATCCACAAT CCCAGCGCCA GACCGCGAAC GGACCGCCAG
CTGCAACAAA AGGATTATAT TCCTGAAATA GTTCCCGCTG CTAAAGGCTT TGTACGCGGG
AGGGTCTGGT ACAGTGCCGA AGCTGTGGTG CCTTATGATG AGGAACGGAT CATTGAGAGT
GGAAATGTTG CCAAAGGCTG GGGTATAAAA TTCGGTGCAC GAGTCATAAT GGTAACAACA
CCGGAATCGC CTTTTAATTT GGTCAAAGAG GAAGTTCAAT ATCATGGGGT AACCTTATGG
AGGAATTGGC GACTTCCTGT CGAAATAGTA TCTGTGCAGT ATAATGAACT GCAGAAGAAG
CAGATTGAAC GAAATGAAAT GGAAGCTCGC CAGGCCGCAG AGGAATTGGC ACGGGCGGAA
GTCCATGAGA CGATTTCCCC GGGAGCTCGT ATTCTGGAGG AAAAGGTTCG TGTCTTGGAA
CAGGCTGACG GTGAGCGCGT GCGCATTGAA GTAGAGTCGT ATGAGGATTT AGCGGTTTAC
CCGGAGGAAT AA
|
|---|
| Protein sequence | MIARFREFLQ GRVLFVARGN QLPRFINEGI RQGIVFYKTQ RSEKGVRAQV KIQDFRRLKR
PARLTHTRVR IVAKYGWPFV AARWWRRKFL LAGIMIIGVA LAVLSQMILS ISVSGNTTIS
SQEIFDSAEK HGLKTWTRQD SVDLNEVSKL LVEEFPDAAW VGISKHGTRV EIKVVQKVRP
QVPGEAGNLV ASKAGLVQQV MVIQGTPLVH EGEIVKPGQV LIQAPRAIHN PSARPRTDRQ
LQQKDYIPEI VPAAKGFVRG RVWYSAEAVV PYDEERIIES GNVAKGWGIK FGARVIMVTT
PESPFNLVKE EVQYHGVTLW RNWRLPVEIV SVQYNELQKK QIERNEMEAR QAAEELARAE
VHETISPGAR ILEEKVRVLE QADGERVRIE VESYEDLAVY PEE
|
|---|
| |