Gene Dhaf_4269 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_4269 
Symbol 
ID7261294 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp4519218 
End bp4519901 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content51% 
IMG OID643564186 
Productformate dehydrogenase, gamma subunit 
Protein accessionYP_002460710 
Protein GI219670275 
COG category[C] Energy production and conversion 
COG ID[COG2864] Cytochrome b subunit of formate dehydrogenase 
TIGRFAM ID[TIGR01583] formate dehydrogenase, gamma subunit 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.308563 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGCAAA ACTCCAAACA AGTCCCGGAA GGAAAAGTTC TGAGATTTAC AGATGGGGAA 
CGATTCAGTC ACTGGGTTCA TGCAGTTTCC TTTTTAATTC TTCTCTTTAC GGGTTTAGCC
GTTTTGTCGG TCACCTTCCG GCCGGCTATG GCCATCGTCG GAGGAATTGA CAACGCCCGC
ATGATTCACC GGGTTGCGGC CCTCTTCTTC GCCGTTGCTG TCGGCATGAA GTTCTTTATC
GGTGACACCA AGCATCACTG GGGGTGGATT CGTTCTGTCT TTACCTGGAC GAAGGCCGAT
GTGATGCATG TCAAAGCCTT TGCCGTGGAA TTCTTCGGCG GGCATGGCAA TTACCCTCCC
CAGGCAAAAT TTAACGGAGG GGAAAAAATC AACTCCCTCT TCACCATTTT TGGCTCTATC
TTTATCACCA TCAGCGGGTT GATCATGTGG TTTCCCCAGT ACTTCCCCAT AGGCTTAGTG
CGCATAGCCT ATCCTGTTCA CGACCTATCC ATGATTTTCA TGACCACCGC TCTGATCGGG
CATCTCTACC TGGCCCTGAT CCATCCCGAA TCACGGGCTG CTCTGCCGGG CATGCTTAAG
GGTTATGTAT CCAAAGGCTT TGCTAAGTCC CATCATGGCG CCTGGTATGA GGAGATTGAA
AAGCAGGAAA AGGCGGGGAA ATAG
 
Protein sequence
MAQNSKQVPE GKVLRFTDGE RFSHWVHAVS FLILLFTGLA VLSVTFRPAM AIVGGIDNAR 
MIHRVAALFF AVAVGMKFFI GDTKHHWGWI RSVFTWTKAD VMHVKAFAVE FFGGHGNYPP
QAKFNGGEKI NSLFTIFGSI FITISGLIMW FPQYFPIGLV RIAYPVHDLS MIFMTTALIG
HLYLALIHPE SRAALPGMLK GYVSKGFAKS HHGAWYEEIE KQEKAGK