Gene Dhaf_4265 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_4265 
Symbol 
ID7261289 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp4513367 
End bp4514548 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content48% 
IMG OID643564181 
Productperiplasmic binding protein 
Protein accessionYP_002460706 
Protein GI219670271 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAGCTG CTCTTAACTA TCTTAAAAAA CTATATTATA AAGAAAAAGG AGGCATTATT 
CACATTATGA GGAAAAAACT TATCTCCATG CTCCTAGCTG CTTCGCTCCT GGTAACCTTT
ACCACTGCCT GCAGTCCCAG CGCAGCCGCC CCCGGCGGCA AGGAATCCGC TCCGGAAACT
TCCACTCAGG GAGATCCCGG CCAGGACAAA TTGGTCAACT TTACGGATTC AGCCGGACGC
ATTGTAGAAG TTCCCGCCAA CATCACCCGG ATTGCAGCCT CGGGCACCAT GGCTCAAATC
GTACTCTTTC CTTTAGCCGC CGATCAGTTT GTGGGCTTAG CCGGCAAATG GGACCCTTCT
GCCCAGGAAT ATCTGGACCC GAAATATGCT AACCTTCCGG TACTGGGGCA GTTCTATGGC
AAAGGCGACC TTAATCTGGA GGAAATCGCT AAAGCCGATC CTCAGATCAT TATCGACATT
GGTGACACCA AGCCCAGCAT TGCTGAAGAT ATGGATGGCA TTATGAATCA AGTGGGCATC
CCCACAGTCC ATATCGGAGC AACCACCGAG ACGATGCCCG AAGCCTACCG GACTTTAGGC
AAGCTGCTTA ATAAAGAGGC AGAGGCTGAA GTCCTTGCCC AGTATTGTGA AGAAGTATTT
AAGAAAACCG AAGATATTAT GGCCAAGGTC GGCGAAGACG GCAAGGCTAA TCTGCTTTAT
TGCCTTGGTG AAAACGGCCT GAATGTCCTG GCGAAAGGTT CTTACCACGC TGAAATTCTC
GATCAGATCA GCAATAACGC AGCCGTTGTC AGTGATGTCT CCAGCAAAGG CAACGGCAAC
CCTGTGGATA TGGAGCAAAT CGTTTTATGG GATCCCGATG TGATTGTCTT TGCTCCGGAT
AGCATCTACA GCACTGTCTC CGGAGAAAAA TCCTGGCAGG AAATAAAAGC CATCAAAAAC
GGCAAATATT ATGAAGTTCC CCTGGGTCCC TATAACTGGA TGGGCAACCC ACCTTCAGTC
AACCGCTATA TTGGCATGAT TTGGCTTACC CAGCTGCTCT ATCCGGAGCA AGCTCAGTAC
GATCTCTATC AAGAGACAGC ACGCTACTAT AAGCTTTTCT ATCATAGTGA TCTGACCGAA
GAGCAATACA AGGCTCTTGT CGCAAACTCC GTTTTTAAAT AA
 
Protein sequence
MKAALNYLKK LYYKEKGGII HIMRKKLISM LLAASLLVTF TTACSPSAAA PGGKESAPET 
STQGDPGQDK LVNFTDSAGR IVEVPANITR IAASGTMAQI VLFPLAADQF VGLAGKWDPS
AQEYLDPKYA NLPVLGQFYG KGDLNLEEIA KADPQIIIDI GDTKPSIAED MDGIMNQVGI
PTVHIGATTE TMPEAYRTLG KLLNKEAEAE VLAQYCEEVF KKTEDIMAKV GEDGKANLLY
CLGENGLNVL AKGSYHAEIL DQISNNAAVV SDVSSKGNGN PVDMEQIVLW DPDVIVFAPD
SIYSTVSGEK SWQEIKAIKN GKYYEVPLGP YNWMGNPPSV NRYIGMIWLT QLLYPEQAQY
DLYQETARYY KLFYHSDLTE EQYKALVANS VFK