Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_4265 |
Symbol | |
ID | 7261289 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | + |
Start bp | 4513367 |
End bp | 4514548 |
Gene Length | 1182 bp |
Protein Length | 393 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 643564181 |
Product | periplasmic binding protein |
Protein accession | YP_002460706 |
Protein GI | 219670271 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAAGCTG CTCTTAACTA TCTTAAAAAA CTATATTATA AAGAAAAAGG AGGCATTATT CACATTATGA GGAAAAAACT TATCTCCATG CTCCTAGCTG CTTCGCTCCT GGTAACCTTT ACCACTGCCT GCAGTCCCAG CGCAGCCGCC CCCGGCGGCA AGGAATCCGC TCCGGAAACT TCCACTCAGG GAGATCCCGG CCAGGACAAA TTGGTCAACT TTACGGATTC AGCCGGACGC ATTGTAGAAG TTCCCGCCAA CATCACCCGG ATTGCAGCCT CGGGCACCAT GGCTCAAATC GTACTCTTTC CTTTAGCCGC CGATCAGTTT GTGGGCTTAG CCGGCAAATG GGACCCTTCT GCCCAGGAAT ATCTGGACCC GAAATATGCT AACCTTCCGG TACTGGGGCA GTTCTATGGC AAAGGCGACC TTAATCTGGA GGAAATCGCT AAAGCCGATC CTCAGATCAT TATCGACATT GGTGACACCA AGCCCAGCAT TGCTGAAGAT ATGGATGGCA TTATGAATCA AGTGGGCATC CCCACAGTCC ATATCGGAGC AACCACCGAG ACGATGCCCG AAGCCTACCG GACTTTAGGC AAGCTGCTTA ATAAAGAGGC AGAGGCTGAA GTCCTTGCCC AGTATTGTGA AGAAGTATTT AAGAAAACCG AAGATATTAT GGCCAAGGTC GGCGAAGACG GCAAGGCTAA TCTGCTTTAT TGCCTTGGTG AAAACGGCCT GAATGTCCTG GCGAAAGGTT CTTACCACGC TGAAATTCTC GATCAGATCA GCAATAACGC AGCCGTTGTC AGTGATGTCT CCAGCAAAGG CAACGGCAAC CCTGTGGATA TGGAGCAAAT CGTTTTATGG GATCCCGATG TGATTGTCTT TGCTCCGGAT AGCATCTACA GCACTGTCTC CGGAGAAAAA TCCTGGCAGG AAATAAAAGC CATCAAAAAC GGCAAATATT ATGAAGTTCC CCTGGGTCCC TATAACTGGA TGGGCAACCC ACCTTCAGTC AACCGCTATA TTGGCATGAT TTGGCTTACC CAGCTGCTCT ATCCGGAGCA AGCTCAGTAC GATCTCTATC AAGAGACAGC ACGCTACTAT AAGCTTTTCT ATCATAGTGA TCTGACCGAA GAGCAATACA AGGCTCTTGT CGCAAACTCC GTTTTTAAAT AA
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Protein sequence | MKAALNYLKK LYYKEKGGII HIMRKKLISM LLAASLLVTF TTACSPSAAA PGGKESAPET STQGDPGQDK LVNFTDSAGR IVEVPANITR IAASGTMAQI VLFPLAADQF VGLAGKWDPS AQEYLDPKYA NLPVLGQFYG KGDLNLEEIA KADPQIIIDI GDTKPSIAED MDGIMNQVGI PTVHIGATTE TMPEAYRTLG KLLNKEAEAE VLAQYCEEVF KKTEDIMAKV GEDGKANLLY CLGENGLNVL AKGSYHAEIL DQISNNAAVV SDVSSKGNGN PVDMEQIVLW DPDVIVFAPD SIYSTVSGEK SWQEIKAIKN GKYYEVPLGP YNWMGNPPSV NRYIGMIWLT QLLYPEQAQY DLYQETARYY KLFYHSDLTE EQYKALVANS VFK
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