Gene Dhaf_4221 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_4221 
Symbol 
ID7261245 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp4466639 
End bp4467790 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content48% 
IMG OID643564139 
Product4Fe-4S ferredoxin iron-sulfur binding domain protein 
Protein accessionYP_002460664 
Protein GI219670229 
COG category[C] Energy production and conversion 
COG ID[COG1143] Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.000152495 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTTTTA ATCACGGTGC AACTATGCAG CTTGACACAA ATCGATGTCT GAATCAGCAG 
CACAATGGTG TGGAATGCAG CCATTGTGTT TCCCGCTGTC CGGGACAAGC TTTAATCCTC
GCTAATCAGC AAATTTATCT GATCCAAGAG CGCTGCCTCG GCTGCGGACT GTGCTTTGCC
GACTGCCCTA CTCAGGTTTT CAGTTCTTCC CAATGGGATG AAACCACAAT TCGCTCAGAT
GTGGAAGAGC AGGGAGCAAA AATCACTCAG ATCTTCTGTG GCTCACATTC GGCTCCCTAT
CTTAGTAAAG AGGATAAGGA GAAGGGAGCG GTGCAGATTC CCACCTGCTT AAGCGCCTTG
TCCAAAGGAG CTTGGTATGA ATTAGGTTTG CTCACTGGAG TGGAGCTGCG TCTGGATGAA
TGCCATGATT GTCCGCTGAA ATCGTGTATC GAGCGAGTCA AATTTGCCCT GGAAACAGCC
ATGGAATGGC TGGAAGCTTC CGGTCATACT CCGGATTTCA CTCTGATTTA TACTGCAGAT
AAAGCCAAAA AGCGCAAAAA GCTCCAGGCC GTATCTTCAG GATTAAAGGT GACCTCCCGC
CGGGATCTGT TTTTAACCTT AATGGGCCGA AAGCACCAGG AGCAGCTCAA GGTGCAAAAG
GGAGTGCCTG GTCGTGAAGA AACCAAAAAA AGGGCAAGAA TCAATACCTT GCCTGATTGG
CAGAAGCGTC TCGAAGATAG TTATTCCAGG CACTATCAGG AAGGAGGAAA TCCTGCTTAT
TGGCCTTTTA TCCAAATGAG CATGGAGTGT GTGAACTGTG GTATGTGTGC CAGGTATTGT
CCTACCCAAG CGTTGAAGAT TCGGGTCGAA GGGAAGGAGT GTATTCATTT CTTCACTGGA
GGGCACTGCA TAGACTGCCG CATCTGTATG CTGTCCTGTC CAACCCGGTC GATTCTTCGG
GATCGTTTAC CCAATGCCGC GCCGTACGAG GAACAATCCA TCTTCAAGGC CTCAGTGGGA
AAATGCAAGC TTTGTGAAGC AGAAACCATC ACCAGTCAGG ATGATTTATG TTACTGGTGT
AAGGAAGAAC CCTCTCAGGA AGACATTCTT TCGGATGTTC GCCAAAAACT CTTTGGAAAG
TTTGTGCCAT GA
 
Protein sequence
MLFNHGATMQ LDTNRCLNQQ HNGVECSHCV SRCPGQALIL ANQQIYLIQE RCLGCGLCFA 
DCPTQVFSSS QWDETTIRSD VEEQGAKITQ IFCGSHSAPY LSKEDKEKGA VQIPTCLSAL
SKGAWYELGL LTGVELRLDE CHDCPLKSCI ERVKFALETA MEWLEASGHT PDFTLIYTAD
KAKKRKKLQA VSSGLKVTSR RDLFLTLMGR KHQEQLKVQK GVPGREETKK RARINTLPDW
QKRLEDSYSR HYQEGGNPAY WPFIQMSMEC VNCGMCARYC PTQALKIRVE GKECIHFFTG
GHCIDCRICM LSCPTRSILR DRLPNAAPYE EQSIFKASVG KCKLCEAETI TSQDDLCYWC
KEEPSQEDIL SDVRQKLFGK FVP