| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_4216 |
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| Symbol | |
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| ID | 7261240 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | - |
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| Start bp | 4460052 |
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| End bp | 4461170 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 643564134 |
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| Product | RNA polymerase sigma factor RpoD |
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| Protein accession | YP_002460659 |
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| Protein GI | 219670224 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02393] RNA polymerase sigma factor RpoD, C-terminal domain
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000000000301264 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATGATG ACCAATTGAA GGTCGATGCG GTAAAAGAAC TGATCCAAAA AGGCAAGAAA
AAAGGTTCTT TAACCTACCG GGAGATCATG GATACCCTCC AAGGAATTGA GCTCACAGCC
GAACAGATTG ATGAAGTGTA TGAACAGATT GGCCGGATGG GGATTGATAT CATCCCTGAA
GCGGGTGAAG TGGAAGCCTT GGAAAAGGTC ACGGACGAAA TCCCCGATGA TGTGGATGAC
CCTGATGTTG AGGAAGAGGT GGATGTGGAT CTTTCCATTC CTGAAGGAGT AGGAATCGAT
GATCCTGTCC GCATGTACCT TAAAGAGATT GGCCGCGTCC CCCTTCTTAC TGCTGAAGAA
GAGATTGAAC TGGCCAAACG CATGGAACAA GGGGACGAGA GCGCTAAACG CCGTTTGGCT
GAAGCCAATT TGCGCCTCGT TGTCAGCATT GCCAAACGTT ATGTAGGCCG GGGGATGCTT
TTCCTGGATT TGATTCAGGA AGGCAACCTG GGACTGATTA AGGCTGTAGA GAAATTTGAT
TACGTCAAAG GCTTTAAGTT CTCAACCTAT GCCACATGGT GGATTCGCCA AGCCATTACC
CGGGCTATTG CCGATCAGGC AAGAACCATT CGGATACCTG TGCATATGGT AGAAACTATC
AATAAGCTGA TTCGGGTATC ACGCCAACTT CTGCAGGAAT TAGGACGTGA ACCAACCCCA
GAAGAGATCG CTGTACAAAT GGATATTTCT GTAGAGCGGG TCCGGGAGAT TATGAAGATT
GCCCAGGAGC CGGTATCCTT GGAGACACCG ATTGGGGAAG AAGAAGACTC CCATTTAGGA
GATTTCATTC CTGATGAAGA TGCCCCGGCC CCTTCGGAGG CAGCTTCCTT TATCCTGTTG
AAAGAGCAAT TGGAAGAGGT CTTAGAGACC CTGACTCCCC GGGAAGAAAA GGTTCTGCGT
TTGCGTTTTG GCCTTGATGA TGGCCGTACC CGGACTTTAG AGGAAGTAGG CCAGGAATTC
GGCGTAACCC GGGAACGGAT TCGCCAGATC GAAGCCAAAG CTCTGCGTAA GCTTCGCCAT
CCCAGCCGCA GCAAGAAGCT CAAGGATTAC CTGGAATAA
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| Protein sequence | MNDDQLKVDA VKELIQKGKK KGSLTYREIM DTLQGIELTA EQIDEVYEQI GRMGIDIIPE
AGEVEALEKV TDEIPDDVDD PDVEEEVDVD LSIPEGVGID DPVRMYLKEI GRVPLLTAEE
EIELAKRMEQ GDESAKRRLA EANLRLVVSI AKRYVGRGML FLDLIQEGNL GLIKAVEKFD
YVKGFKFSTY ATWWIRQAIT RAIADQARTI RIPVHMVETI NKLIRVSRQL LQELGREPTP
EEIAVQMDIS VERVREIMKI AQEPVSLETP IGEEEDSHLG DFIPDEDAPA PSEAASFILL
KEQLEEVLET LTPREEKVLR LRFGLDDGRT RTLEEVGQEF GVTRERIRQI EAKALRKLRH
PSRSKKLKDY LE
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