| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_4214 |
|---|
| Symbol | |
|---|
| ID | 7261235 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | - |
|---|
| Start bp | 4457651 |
|---|
| End bp | 4458817 |
|---|
| Gene Length | 1167 bp |
|---|
| Protein Length | 388 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 643564129 |
|---|
| Product | protein of unknown function DUF34 |
|---|
| Protein accession | YP_002460657 |
|---|
| Protein GI | 219670222 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3323] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR00486] dinuclear metal center protein, YbgI/SA1388 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0000000117062 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGTTT CCGTCGGTTT AATCGCTCAG ATCATTGAAA GGGTTGCCCC CAAAGCCTGG
GCTGAGGAAT GGGACAATGT GGGGCTCCTG GTAGGGGATT TTGCCGCTCC TGTCGAGCGG
ATTCTGGTGG CGTTGGATGC CACTCCGGAA GTTCTGCAGG AAGCCCGGGA AAAGGATGTG
CAGCTCATCG TAGCTCATCA TCCCATCCTG TTCAGAGCCC TGAAAAATCT CCGCTCCGAC
AACCAAAGCG CAAGACTGCC GATCCAAATG ATTCAATCAG GAATTGCCTA CTATGCCGCC
CATACCAATT TGGATCAATC CCCCCTGTCT TCCAGCTGGA GTCTGGGAAG GGCCTTAGAG
TTGGAAAAGA TGGAATATCT TAAGCTAACT CATGCGGAAA AACTCGTCAA ATTGGTAACC
TTTGTTCCTA AAGACCATGC CGAGGCAGTT CGCCAGGCTC TCGTAAACGT TGGAGTCGGG
GAAGGCATCA CTGGCGGACC TCATGCTTCT GAGTATGCGG AGTGTTTTTT CGCGGTGGCC
GGAGCCGGAA TGTTCCGCCC TCTGGATAAT GCTCATCCTA CTATCGGTGA GGTTGGCGAA
TTGACGCGGG TAGAGGAGAT AAGGCTGGAA AGCATTCTGC CGGAGAACCG CATCGACCGT
GTAGTGAAAG CCTTGCAGAA AGCACACCCT TATGAGGAGC CGGCCTATGA TTTAATCCCT
CTCTACAATA GGGGAGCAAG CCGGGGTTAT GGTGTCATCG GTTATTTAAA AGTGCCTGAG
AGCCTGGGCA GTTTTGCGCG TAAATTATCC GCCGGCTTAA GAAAGCTTGC TCCTGCCTCC
TTAGCAGAGG AACCCAAGGT GCGCGCTTCT GGAAATCCGG AACAGATTCT TCGCAAAATA
GCCATTGTTA ATGGAAGCGG CGGAAGCTTT ATCTCCCAAG CCCTCTTCAA AGGAGCCGAC
CTCTTAATCA CCGGCGATGT GGATCATCAT GAAGTTCTGG ATGCCCTTGA AGCAGGGCTG
CCCATCATGG ATATGGGGCA CTTTTGGGGC GAAGCTCCCA TGGTCAAGAC CCTGGCAGAG
CATTTAAAAG CAGAGAAAGC CCTGGCAGGG GTTGAGGTGA TCATCAGTCA AGAGATGAAA
AACCCATGGA GGGCACTGAA TAGTTAG
|
|---|
| Protein sequence | MPVSVGLIAQ IIERVAPKAW AEEWDNVGLL VGDFAAPVER ILVALDATPE VLQEAREKDV
QLIVAHHPIL FRALKNLRSD NQSARLPIQM IQSGIAYYAA HTNLDQSPLS SSWSLGRALE
LEKMEYLKLT HAEKLVKLVT FVPKDHAEAV RQALVNVGVG EGITGGPHAS EYAECFFAVA
GAGMFRPLDN AHPTIGEVGE LTRVEEIRLE SILPENRIDR VVKALQKAHP YEEPAYDLIP
LYNRGASRGY GVIGYLKVPE SLGSFARKLS AGLRKLAPAS LAEEPKVRAS GNPEQILRKI
AIVNGSGGSF ISQALFKGAD LLITGDVDHH EVLDALEAGL PIMDMGHFWG EAPMVKTLAE
HLKAEKALAG VEVIISQEMK NPWRALNS
|
|---|
| |